Stage 4: TOML integrations — gemini and tabnine migrated to plugin architecture (#2050)

Add TomlIntegration base class in base.py that mirrors MarkdownIntegration:
- Overrides command_filename() for .toml extension
- Extracts description from YAML frontmatter for top-level TOML key
- Renders prompt body in TOML multiline basic strings with escaped backslashes
- Keeps full processed template (including frontmatter) as prompt body
- Byte-for-byte parity with v0.4.4 release ZIP output

Create integrations/gemini/ and integrations/tabnine/ subpackages:
- Config-only __init__.py subclassing TomlIntegration
- Integration-specific update-context scripts (sh + ps1)

Add TomlIntegrationTests mixin with TOML-specific validations:
- Valid TOML parsing, description/prompt keys, {{args}} placeholder
- Setup/teardown, manifest tracking, install/uninstall round-trips
- CLI auto-promote (--ai) and --integration flag tests
- Complete file inventory tests (sh + ps)

Register both in INTEGRATION_REGISTRY; --ai auto-promote works automatically.

src/specify_cli/integrations/__init__.py

@@ -53,6 +53,7 @@ def _register_builtins() -> None:
     from .codebuddy import CodebuddyIntegration
     from .copilot import CopilotIntegration
     from .cursor_agent import CursorAgentIntegration
+    from .gemini import GeminiIntegration
     from .iflow import IflowIntegration
     from .junie import JunieIntegration
     from .kilocode import KilocodeIntegration
@@ -63,6 +64,7 @@ def _register_builtins() -> None:
     from .qwen import QwenIntegration
     from .roo import RooIntegration
     from .shai import ShaiIntegration
+    from .tabnine import TabnineIntegration
     from .trae import TraeIntegration
     from .vibe import VibeIntegration
     from .windsurf import WindsurfIntegration
@@ -75,6 +77,7 @@ def _register_builtins() -> None:
     _register(CodebuddyIntegration())
     _register(CopilotIntegration())
     _register(CursorAgentIntegration())
+    _register(GeminiIntegration())
     _register(IflowIntegration())
     _register(JunieIntegration())
     _register(KilocodeIntegration())
@@ -85,6 +88,7 @@ def _register_builtins() -> None:
     _register(QwenIntegration())
     _register(RooIntegration())
     _register(ShaiIntegration())
+    _register(TabnineIntegration())
     _register(TraeIntegration())
     _register(VibeIntegration())
     _register(WindsurfIntegration())

src/specify_cli/integrations/base.py

@@ -5,6 +5,8 @@ Provides:
 - ``IntegrationBase`` — abstract base every integration must implement.
 - ``MarkdownIntegration`` — concrete base for standard Markdown-format
   integrations (the common case — subclass, set three class attrs, done).
+- ``TomlIntegration`` — concrete base for TOML-format integrations
+  (Gemini, Tabnine — subclass, set three class attrs, done).
 """
 
 from __future__ import annotations
@@ -498,3 +500,136 @@ class MarkdownIntegration(IntegrationBase):
 
         created.extend(self.install_scripts(project_root, manifest))
         return created
+
+
+# ---------------------------------------------------------------------------
+# TomlIntegration — TOML-format agents (Gemini, Tabnine)
+# ---------------------------------------------------------------------------
+
+class TomlIntegration(IntegrationBase):
+    """Concrete base for integrations that use TOML command format.
+
+    Mirrors ``MarkdownIntegration`` closely: subclasses only need to set
+    ``key``, ``config``, ``registrar_config`` (and optionally
+    ``context_file``).  Everything else is inherited.
+
+    ``setup()`` processes command templates through the same placeholder
+    pipeline as ``MarkdownIntegration``, then converts the result to
+    TOML format (``description`` key + ``prompt`` multiline string).
+    """
+
+    def command_filename(self, template_name: str) -> str:
+        """TOML commands use ``.toml`` extension."""
+        return f"speckit.{template_name}.toml"
+
+    @staticmethod
+    def _extract_description(content: str) -> str:
+        """Extract the ``description`` value from YAML frontmatter.
+
+        Scans lines between the first pair of ``---`` delimiters for a
+        top-level ``description:`` key.  Returns the value (with
+        surrounding quotes stripped) or an empty string if not found.
+        """
+        in_frontmatter = False
+        for line in content.splitlines():
+            stripped = line.rstrip("\n\r")
+            if stripped == "---":
+                if not in_frontmatter:
+                    in_frontmatter = True
+                    continue
+                break  # second ---
+            if in_frontmatter and stripped.startswith("description:"):
+                _, _, value = stripped.partition(":")
+                return value.strip().strip('"').strip("'")
+        return ""
+
+    @staticmethod
+    def _render_toml(description: str, body: str) -> str:
+        """Render a TOML command file from description and body.
+
+        Uses multiline basic strings (``\"\"\"``) with backslashes
+        escaped, matching the output of the release script.  Falls back
+        to multiline literal strings (``'''``) if the body contains
+        ``\"\"\"``, then to an escaped basic string as a last resort.
+
+        The body is rstrip'd so the closing delimiter appears on the line
+        immediately after the last content line — matching the release
+        script's ``echo "$body"; echo '\"\"\"'`` pattern.
+        """
+        toml_lines: list[str] = []
+
+        if description:
+            desc = description.replace('"', '\\"')
+            toml_lines.append(f'description = "{desc}"')
+            toml_lines.append("")
+
+        body = body.rstrip("\n")
+
+        # Escape backslashes for basic multiline strings.
+        escaped = body.replace("\\", "\\\\")
+
+        if '"""' not in escaped:
+            toml_lines.append('prompt = """')
+            toml_lines.append(escaped)
+            toml_lines.append('"""')
+        elif "'''" not in body:
+            toml_lines.append("prompt = '''")
+            toml_lines.append(body)
+            toml_lines.append("'''")
+        else:
+            escaped_body = (
+                body.replace("\\", "\\\\")
+                .replace('"', '\\"')
+                .replace("\n", "\\n")
+                .replace("\r", "\\r")
+                .replace("\t", "\\t")
+            )
+            toml_lines.append(f'prompt = "{escaped_body}"')
+
+        return "\n".join(toml_lines) + "\n"
+
+    def setup(
+        self,
+        project_root: Path,
+        manifest: IntegrationManifest,
+        parsed_options: dict[str, Any] | None = None,
+        **opts: Any,
+    ) -> list[Path]:
+        templates = self.list_command_templates()
+        if not templates:
+            return []
+
+        project_root_resolved = project_root.resolve()
+        if manifest.project_root != project_root_resolved:
+            raise ValueError(
+                f"manifest.project_root ({manifest.project_root}) does not match "
+                f"project_root ({project_root_resolved})"
+            )
+
+        dest = self.commands_dest(project_root).resolve()
+        try:
+            dest.relative_to(project_root_resolved)
+        except ValueError as exc:
+            raise ValueError(
+                f"Integration destination {dest} escapes "
+                f"project root {project_root_resolved}"
+            ) from exc
+        dest.mkdir(parents=True, exist_ok=True)
+
+        script_type = opts.get("script_type", "sh")
+        arg_placeholder = self.registrar_config.get("args", "{{args}}") if self.registrar_config else "{{args}}"
+        created: list[Path] = []
+
+        for src_file in templates:
+            raw = src_file.read_text(encoding="utf-8")
+            description = self._extract_description(raw)
+            processed = self.process_template(raw, self.key, script_type, arg_placeholder)
+            toml_content = self._render_toml(description, processed)
+            dst_name = self.command_filename(src_file.stem)
+            dst_file = self.write_file_and_record(
+                toml_content, dest / dst_name, project_root, manifest
+            )
+            created.append(dst_file)
+
+        created.extend(self.install_scripts(project_root, manifest))
+        return created

src/specify_cli/integrations/gemini/__init__.py

@@ -0,0 +1,21 @@
+"""Gemini CLI integration."""
+
+from ..base import TomlIntegration
+
+
+class GeminiIntegration(TomlIntegration):
+    key = "gemini"
+    config = {
+        "name": "Gemini CLI",
+        "folder": ".gemini/",
+        "commands_subdir": "commands",
+        "install_url": "https://github.com/google-gemini/gemini-cli",
+        "requires_cli": True,
+    }
+    registrar_config = {
+        "dir": ".gemini/commands",
+        "format": "toml",
+        "args": "{{args}}",
+        "extension": ".toml",
+    }
+    context_file = "GEMINI.md"

src/specify_cli/integrations/gemini/scripts/update-context.ps1

@@ -0,0 +1,23 @@
+# update-context.ps1 — Gemini CLI integration: create/update GEMINI.md
+#
+# Thin wrapper that delegates to the shared update-agent-context script.
+# Activated in Stage 7 when the shared script uses integration.json dispatch.
+#
+# Until then, this delegates to the shared script as a subprocess.
+
+$ErrorActionPreference = 'Stop'
+
+# Derive repo root from script location (walks up to find .specify/)
+$scriptDir = Split-Path -Parent $MyInvocation.MyCommand.Definition
+$repoRoot = try { git rev-parse --show-toplevel 2>$null } catch { $null }
+# If git did not return a repo root, or the git root does not contain .specify,
+# fall back to walking up from the script directory to find the initialized project root.
+if (-not $repoRoot -or -not (Test-Path (Join-Path $repoRoot '.specify'))) {
+    $repoRoot = $scriptDir
+    $fsRoot = [System.IO.Path]::GetPathRoot($repoRoot)
+    while ($repoRoot -and $repoRoot -ne $fsRoot -and -not (Test-Path (Join-Path $repoRoot '.specify'))) {
+        $repoRoot = Split-Path -Parent $repoRoot
+    }
+}
+
+& "$repoRoot/.specify/scripts/powershell/update-agent-context.ps1" -AgentType gemini

src/specify_cli/integrations/gemini/scripts/update-context.sh

@@ -0,0 +1,28 @@
+#!/usr/bin/env bash
+# update-context.sh — Gemini CLI integration: create/update GEMINI.md
+#
+# Thin wrapper that delegates to the shared update-agent-context script.
+# Activated in Stage 7 when the shared script uses integration.json dispatch.
+#
+# Until then, this delegates to the shared script as a subprocess.
+
+set -euo pipefail
+
+# Derive repo root from script location (walks up to find .specify/)
+_script_dir="$(cd "$(dirname "$0")" && pwd)"
+_root="$_script_dir"
+while [ "$_root" != "/" ] && [ ! -d "$_root/.specify" ]; do _root="$(dirname "$_root")"; done
+if [ -z "${REPO_ROOT:-}" ]; then
+  if [ -d "$_root/.specify" ]; then
+    REPO_ROOT="$_root"
+  else
+    git_root="$(git rev-parse --show-toplevel 2>/dev/null || true)"
+    if [ -n "$git_root" ] && [ -d "$git_root/.specify" ]; then
+      REPO_ROOT="$git_root"
+    else
+      REPO_ROOT="$_root"
+    fi
+  fi
+fi
+
+exec "$REPO_ROOT/.specify/scripts/bash/update-agent-context.sh" gemini

src/specify_cli/integrations/tabnine/__init__.py

@@ -0,0 +1,21 @@
+"""Tabnine CLI integration."""
+
+from ..base import TomlIntegration
+
+
+class TabnineIntegration(TomlIntegration):
+    key = "tabnine"
+    config = {
+        "name": "Tabnine CLI",
+        "folder": ".tabnine/agent/",
+        "commands_subdir": "commands",
+        "install_url": "https://docs.tabnine.com/main/getting-started/tabnine-cli",
+        "requires_cli": True,
+    }
+    registrar_config = {
+        "dir": ".tabnine/agent/commands",
+        "format": "toml",
+        "args": "{{args}}",
+        "extension": ".toml",
+    }
+    context_file = "TABNINE.md"

src/specify_cli/integrations/tabnine/scripts/update-context.ps1

@@ -0,0 +1,23 @@
+# update-context.ps1 — Tabnine CLI integration: create/update TABNINE.md
+#
+# Thin wrapper that delegates to the shared update-agent-context script.
+# Activated in Stage 7 when the shared script uses integration.json dispatch.
+#
+# Until then, this delegates to the shared script as a subprocess.
+
+$ErrorActionPreference = 'Stop'
+
+# Derive repo root from script location (walks up to find .specify/)
+$scriptDir = Split-Path -Parent $MyInvocation.MyCommand.Definition
+$repoRoot = try { git rev-parse --show-toplevel 2>$null } catch { $null }
+# If git did not return a repo root, or the git root does not contain .specify,
+# fall back to walking up from the script directory to find the initialized project root.
+if (-not $repoRoot -or -not (Test-Path (Join-Path $repoRoot '.specify'))) {
+    $repoRoot = $scriptDir
+    $fsRoot = [System.IO.Path]::GetPathRoot($repoRoot)
+    while ($repoRoot -and $repoRoot -ne $fsRoot -and -not (Test-Path (Join-Path $repoRoot '.specify'))) {
+        $repoRoot = Split-Path -Parent $repoRoot
+    }
+}
+
+& "$repoRoot/.specify/scripts/powershell/update-agent-context.ps1" -AgentType tabnine

src/specify_cli/integrations/tabnine/scripts/update-context.sh

@@ -0,0 +1,28 @@
+#!/usr/bin/env bash
+# update-context.sh — Tabnine CLI integration: create/update TABNINE.md
+#
+# Thin wrapper that delegates to the shared update-agent-context script.
+# Activated in Stage 7 when the shared script uses integration.json dispatch.
+#
+# Until then, this delegates to the shared script as a subprocess.
+
+set -euo pipefail
+
+# Derive repo root from script location (walks up to find .specify/)
+_script_dir="$(cd "$(dirname "$0")" && pwd)"
+_root="$_script_dir"
+while [ "$_root" != "/" ] && [ ! -d "$_root/.specify" ]; do _root="$(dirname "$_root")"; done
+if [ -z "${REPO_ROOT:-}" ]; then
+  if [ -d "$_root/.specify" ]; then
+    REPO_ROOT="$_root"
+  else
+    git_root="$(git rev-parse --show-toplevel 2>/dev/null || true)"
+    if [ -n "$git_root" ] && [ -d "$git_root/.specify" ]; then
+      REPO_ROOT="$git_root"
+    else
+      REPO_ROOT="$_root"
+    fi
+  fi
+fi
+
+exec "$REPO_ROOT/.specify/scripts/bash/update-agent-context.sh" tabnine