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Author SHA1 Message Date
Manfred Riem
53d9543355 feat: make agent-context extension a full opt-in (#3097) 
* docs: add Spec Kit spec for agent-context full opt-in

Use Spec Kit's own specify workflow to author the spec that makes the
agent-context extension a full opt-in, removing all agent-context
configuration/support from the Python codebase and removing the
deprecation message. Force-added despite specs/ being gitignored; the
generated artifact will be purged prior to merge.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* docs: add Spec Kit plan artifacts for agent-context full opt-in

Phase 0/1 of the SDD plan workflow: plan.md, research.md, data-model.md,
quickstart.md, and contracts/cli-behavior.md. Constitution Check is a
documented no-op (repo has no ratified constitution). Force-added despite
specs/ being gitignored; generated artifacts will be purged prior to merge.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* docs: correct Constitution Check against ratified v1.0.0

Earlier draft wrongly treated the gate as a no-op; the fork's main is 16
commits behind upstream/main, which carries .specify/memory/constitution.md.
Re-evaluate the feature against Principles I-V (all PASS) and note that
Principle I mandates keeping context_file as a declared class attribute,
validating the R1 metadata decision.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* docs: refresh plan artifacts against synced upstream/main

After syncing fork main to upstream and rebasing, re-scan the current
agent-context surface. Upstream generalized the single context_file into a
plural context_files concept with new resolver helpers
(_resolve_context_files, _resolve_context_file_values,
_format_context_file_values) and upsert/remove now loop over multiple
files. Update research.md, data-model.md, contracts, quickstart grep
guards, and the plan summary to cover the expanded removal scope.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* docs: add Spec Kit tasks for agent-context full opt-in

Phase 2 of SDD: dependency-ordered tasks.md (30 tasks) organized by the
three user stories, with mandatory test tasks (Constitution Principle II)
and a foundational phase decoupling __CONTEXT_FILE__ resolution from the
extension config. Includes the extension self-seeding task (T015) and a
static guard test (T002) enforcing zero agent-context references in the CLI.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* feat!: remove agent-context lifecycle from the Specify CLI

Make the agent-context extension a full opt-in. The CLI no longer
installs the extension during init, writes agent-context-config.yml,
or creates/updates/removes the managed Spec Kit section in agent
context files. Context-section upsert/remove, marker resolution,
extension-enabled gating, the config helpers, and the obsolete inline
deprecation warning are all removed. Integration context_file stays as
inert metadata; __CONTEXT_FILE__ now resolves from registry metadata.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* feat(agent-context): self-seed context file from the active integration

When agent-context-config.yml has no context_file/context_files, the
bundled bash and PowerShell update scripts now resolve the context file
from the active integration in .specify/init-options.json via the
integration registry, so the extension no longer depends on the CLI
writing its config.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* test+docs: update suite and docs for agent-context opt-in

Update integration/extension tests to expect no agent-context install,
config, or context-section writes during init. Add a static guard test
(test_agent_context_cli_free.py) asserting the CLI source is free of
agent-context lifecycle symbols, plus backward-compatibility tests for
legacy projects. Refresh AGENTS.md, the extension README, and add a
CHANGELOG entry describing the opt-in behavior change.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* fix(agent-context): warn on self-seed failure, correct docs, speed up guard test

Address PR review feedback:
- Self-seed scripts (bash + PowerShell) now emit an actionable warning when
  an active integration is configured but specify_cli cannot be imported by
  the chosen Python (e.g. pipx installs), or when the integration declares no
  context file, instead of silently falling through to 'nothing to do'.
- Correct the extension README disable note: command rendering never reads the
  extension config; __CONTEXT_FILE__ is always substituted from integration
  metadata, so a stale context_files value cannot affect rendering.
- Cache CLI source reads in the static guard test via a module-scoped fixture
  so the directory walk happens once instead of once per forbidden symbol.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* feat(agent-context): ship self-owned per-agent context-file defaults

The extension now bundles agent-context-defaults.json (key→context_file
map) and self-seeds from it, dropping any dependency on the Specify CLI
registry. Both the bash and PowerShell update scripts read the bundled
JSON map keyed by the active integration from init-options.json.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* feat!: remove all agent-context state from the Specify CLI

Strip every context_file reference from the CLI: the field on all 35
integration classes, the IntegrationBase plumbing (process_template
param/step, _context_file_display, docstrings), the __CONTEXT_FILE__
resolution in agents.py, the legacy context_file/context_markers
popping in _helpers.py, and the context_file template in
integration_scaffold.py. Also drop the Agent context update step and
__CONTEXT_FILE__ placeholder from templates/commands/plan.md.

The agent-context extension now solely owns all context-file knowledge,
including the per-agent default mapping.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* test: drop context_file coverage and guard against CLI reintroduction

Remove CONTEXT_FILE attrs and context_file assertions across the base
mixins, all 35 per-integration test files, shared integration tests, and
conftest stubs. Rewrite the base-mixin context tests to assert no managed
section is written and no __CONTEXT_FILE__ placeholder survives. Extend
the CLI-free static guard to forbid context_file, __CONTEXT_FILE__, and
_context_file_display in src/specify_cli, and have the extension tests
copy the bundled defaults JSON so self-seed runs without the CLI.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* docs: reflect full removal of agent-context state from the CLI

Update AGENTS.md (integration examples, required-fields table, context
behavior section, pitfalls), CHANGELOG, and the SDD spec artifacts
(FR-007, SC-002, data-model) to state that the CLI carries no
context_file and the extension fully owns the per-agent default mapping
via agent-context-defaults.json.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* docs: align SDD artifacts with full context_file removal

Update research.md (R1, R2, R4, summary table), contracts/cli-behavior.md
(C3, C5), tasks.md (Phase 2, T026, notes), plan.md (Principle I, source
map), and checklists/requirements.md so the spec artifacts reflect the
implemented decision: the CLI carries no context_file attribute or
__CONTEXT_FILE__ resolution, and the per-agent defaults map lives in the
extension. Resolves PR review #4548130110.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* docs: scrub stale context-file mentions from CLI docstrings

Update the multi_install_safe docstring (drop the removed "context file"
invariant), the RovoDev setup docstring (no longer upserts a context
section), the Copilot module docstring (drop the context-file line), and
tighten the _update_init_options_for_integration note. Pure docstring
changes — no behavioral impact. Resolves PR review #4548237085.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* test+docs: harden agent-context test helper and fix stale docs

- base.py: document multi_install_safe as an optional subclass attribute
  in the IntegrationBase docstring.
- test_cli.py: clarify the init-options assertion is guarding against
  leftover legacy agent-context keys, not relocation.
- test_extension_agent_context.py: _install_agent_context_config now
  asserts the bundled agent-context-defaults.json exists and always
  copies it, so self-seeding tests fail loudly instead of silently
  skipping when the map is missing.
- test_integration_cursor_agent.py: drop Path/IntegrationManifest imports
  left unused after removing the context-section frontmatter tests.

Resolves PR review #4548293116.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* chore: remove gitignored SDD artifacts from specs/

The specs/001-agent-context-full-optin/ artifacts were force-added for
dogfooding visibility, but specs/ is gitignored and these were always
intended to be purged before merge. Remove them so merging does not add
an intentionally-untracked directory to repo history.

Assisted-by: GitHub Copilot (model: Claude Opus 4.8, autonomous)
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* chore: keep CHANGELOG.md identical to upstream

CHANGELOG.md is auto-generated at release time, so the branch should not
carry a manual entry. Restore it to match upstream/main exactly.

Assisted-by: GitHub Copilot (model: Claude Opus 4.8, autonomous)
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* fix: preserve Cursor .mdc frontmatter in agent-context updater scripts

The bundled agent-context updater scripts wrote the managed section as
plain text. For Cursor-style `.mdc` targets this dropped the required
`---\nalwaysApply: true\n---` frontmatter, reintroducing the rule-loading
bug originally fixed in #1699. Port the `_ensure_mdc_frontmatter` logic
into both the bash and PowerShell updaters: prepend frontmatter when
missing, repair `alwaysApply` when set to the wrong value, and leave
non-`.mdc` targets untouched. Add regression tests covering both shells.

Assisted-by: GitHub Copilot (model: Claude Opus 4.8, autonomous)
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* test: scope CLI-free guard to agent-context-specific symbols

Drop the bare "context_file" substring from FORBIDDEN_SYMBOLS so the
guard no longer fails on unrelated future CLI fields named context_file.
The list still covers agent-context-specific identifiers (__CONTEXT_FILE__,
_context_file_display, _resolve_context_files, _resolve_context_file_values).

Assisted-by: GitHub Copilot (model: Claude Opus 4.8, autonomous)
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* fix: harden agent-context bash self-seed against malformed init JSON

Two robustness fixes in the embedded Python self-seed logic:
- Coerce the integration value from init-options.json to a string only when
  it is actually a string; otherwise treat it as unset so a corrupted
  dict/list value degrades to the existing nothing-to-do behavior instead of
  breaking the agents-map lookup.
- Normalize agent-context-defaults.json: only use 'agents' when both the JSON
  root and the 'agents' value are dicts, so a wrong-shaped (but valid) JSON
  falls back to the warning path instead of raising on .get.

Assisted-by: GitHub Copilot (model: Claude Opus 4.8, autonomous)
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* fix: correct PowerShell hyphenated key lookup and regex replace count

- Self-seed now reads the defaults mapping via
  $defaults.agents.PSObject.Properties[$integrationKey].Value instead of
  member access ($defaults.agents.$integrationKey), which parsed hyphenated
  keys like 'cursor-agent'/'kiro-cli' as subtraction and failed to resolve.
- Replace the static [regex]::Replace(..., 1) call, whose trailing 1 was
  interpreted as RegexOptions.IgnoreCase rather than a replacement count, with
  an instance Regex whose Replace(input, replacement, 1) limits to the first
  match as intended.

Assisted-by: GitHub Copilot (model: Claude Opus 4.8, autonomous)
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* fix: make bash .mdc frontmatter guard case-insensitive

The bash updater only injected Cursor .mdc frontmatter when ctx_path ended
in lowercase '.mdc', so a mixed/upper-case extension (e.g. specify-rules.MDC)
was skipped and Cursor would not auto-load the rule file. Compare against the
casefolded path. The PowerShell variant already uses -match, which is
case-insensitive by default, so no change is needed there.

Assisted-by: GitHub Copilot (model: Claude Opus 4.8, autonomous)
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* docs: document separator-agnostic agent-context update invocation

The README hard-coded the dot-notation slash command
(/speckit.agent-context.update), which hyphen-separator agents like Forge and
Cline do not recognize. Document the canonical command ID plus both slash
invocations so users copy the form their agent accepts.

Assisted-by: GitHub Copilot (model: Claude Opus 4.8, autonomous)
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

---------

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
 2026-06-29 15:27:26 -05:00
Manfred Riem
c49966da4d fix(claude): stop forking /speckit-analyze to prevent long-session freezes (#3188) 
PR #2511 added `context: fork` + `agent: general-purpose` to the generated
speckit-analyze SKILL.md on the assumption that its heavy reads collapse to a
short summary. In practice /speckit-analyze returns a 300-500 line report that
is injected back into the main conversation. In long sessions each subsequent
fork inherits that growing context, compounding overhead until the chat
freezes (#3185).

Empty FORK_CONTEXT_COMMANDS so no command opts into context: fork, restoring
direct in-session execution for analyze. The injection mechanism is retained
so a command can be re-enabled once it genuinely returns a compact result.

Fixes #3185

Assisted-by: GitHub Copilot (model: Claude Opus 4.8, autonomous)

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
 2026-06-26 12:11:54 -05:00
Ed Harrod
98ee02a98b feat(claude): run /analyze in a forked subagent (#2511) 
* claude: run /analyze in a forked subagent

/analyze is explicitly read-only and produces a compact analysis
report from heavy artefact reads (spec.md, plan.md, tasks.md). It
matches the canonical use case for context: fork — bulk inputs that
collapse to a short summary, no need for conversation history.

Forking keeps the artefact contents out of the main conversation
context, which is the concern raised in #752.

Done as a per-command opt-in via FORK_CONTEXT_COMMANDS so other
spec-kit commands (which are interactive or have side effects) are
unaffected.

Refs #752

* claude: apply per-command frontmatter on every skill-generation path

argument-hint and fork context were injected only in setup(), so skills
produced via post_process_skill_content() directly (presets, extensions)
lost them - e.g. a preset overriding speckit-analyze dropped context: fork.

Move the per-command injection into post_process_skill_content(), deriving
the command stem from the frontmatter name, so all generation paths stay
consistent. setup() now just calls post_process_skill_content().

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* claude: drop redundant post-process loop from setup

SkillsIntegration.setup() already runs post_process_skill_content()
on every SKILL.md before writing it, and that method now applies the
argument-hint and fork-context injection. The per-file re-process loop
in ClaudeIntegration.setup() was therefore a no-op, so inherit the
base setup() directly.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
 2026-06-19 10:28:45 -05:00
Ben Buttigieg
0c29d890ab feat: add /speckit.converge command (#3001) 
* Add /speckit.converge SDD artifacts and project scaffolding

Dogfood the converge feature through Spec Kit's own workflow:

- spec.md, plan.md, tasks.md, research, data-model, contracts, quickstart
- requirements checklist for the feature
- ratified constitution v1.0.0 (.specify/memory)
- Specify project scaffolding (.specify/, .github agent + prompt files)

Defines a built-in /speckit.converge command that assesses spec/plan/tasks
against the codebase and appends remaining work as new tasks (no git, no
change tracking, append-only). Implementation not yet started.

Excludes unrelated working-tree changes to agents.py, extensions.py,
test_extensions.py, catalog.community.json, and README.md.

* Implement /speckit.converge command

Add the built-in converge command that assesses the codebase against a
feature's spec.md, plan.md, and tasks.md and appends remaining unbuilt work
as new traceable tasks to tasks.md (append-only; no git, no change tracking).

- templates/commands/converge.md: full command body (load artifacts, assess
  code, classify findings missing/partial/contradicts/unrequested, append
  '## Phase N — Convergence' tasks with source-ref + gap-type, read-only
  guardrails, converged branch, handoff, before/after_converge hooks)
- Register converge as a core command across all enumeration sites
  (SKILL_DESCRIPTIONS, _FALLBACK_CORE_COMMAND_NAMES, ARGUMENT_HINTS, and the
  integration test command lists incl. copilot/generic file inventories)
- init.py Next Steps panel + README Core Commands table
- tasks.md: T001-T024 complete (T025 manual quickstart pending)

Full suite green: 2343 passed.

* Record quickstart validation results for /speckit.converge (T025)

All six quickstart scenarios validated (GitHub Copilot agent, macOS/zsh):
S1 gap->appended traceable task, S2 implement+re-converge, S3 converged leaves
tasks.md unchanged, S4 read-only boundaries, S5 missing-prereq stop, S6 cross-
integration install (copilot + windsurf). Automated suite: 2343 passed.

* Record 2026-06-16 re-verification results for /speckit.converge (T025)

* Potential fix for pull request finding

Co-authored-by: Copilot Autofix powered by AI <175728472+Copilot@users.noreply.github.com>

* Potential fix for pull request finding

Co-authored-by: Copilot Autofix powered by AI <175728472+Copilot@users.noreply.github.com>

* Fix integration upgrade deleting settings.json and dropping script +x

Two upgrade-path bugs surfaced during converge E2E validation:

- copilot upgrade stale-deleted .vscode/settings.json because setup() only tracks the file when it creates it; on upgrade the pre-existing file is merged and left untracked, so Phase 2 stale cleanup removed it. Add an integration-level stale_cleanup_exclusions() hook (CopilotIntegration returns {.vscode/settings.json}) and subtract it from stale_keys.

- shared .specify/scripts/*.sh lost their execute bit because the managed refresh rewrites them with the bundled source mode (often 0o644) and nothing restored perms. Call ensure_executable_scripts() after the managed-refresh block (POSIX only).

Add regression tests in TestIntegrationUpgrade covering both fixes (validated to fail without the fixes).

* fix: resolve markdownlint errors in PR files

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* chore: clean up runtime state files from PR

Remove .specify state files that are per-project runtime artifacts:
- feature.json, init-options.json, integration.json
- manifest files, extension registry, bug artifacts

These are generated by 'specify init' and should not be committed.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* feat: fold converge artifacts from #3003 and #3005

- Add speckit.converge Copilot agent and prompt files (#3003)
- Add regression test for Claude argument hints (#3005)
- Remove invalid converge entry from Claude argument hints
- Fix documentation removing branch-prefix fallback claims

Supersedes: #3003, #3005

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* chore: remove non-converge specify scaffolding from PR

Remove .specify/ artifacts, non-converge .github/agents and prompts,
and copilot-instructions.md that were generated by 'specify init'
and are not part of the converge command feature.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* chore: remove SDD spec artifacts from PR

Remove specs/001-converge-command/ — the spec/plan/tasks/research SDD
artifacts produced while building this feature. spec-kit does not track
a specs/ directory on main (those are outputs of running the workflow on
the repo, not part of the shipped tool).

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* chore: remove generated Copilot converge command files

Remove .github/agents/speckit.converge.agent.md and
.github/prompts/speckit.converge.prompt.md — these are generated by
'specify init --integration copilot' from templates/commands/converge.md
(all __SPECKIT_COMMAND_*__/{SCRIPT} tokens are resolved). main tracks no
.github/agents or .github/prompts files; the template is the source of truth.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* chore: split out unrelated integration-upgrade fix

Move the stale_cleanup_exclusions / executable-bit upgrade fix
(base.py, copilot, _migrate_commands.py, test_integration_subcommand.py)
out of this PR into its own change. This PR is now scoped purely to the
/speckit.converge command.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* fix: add converge to core command template ordering

converge is a core command in SKILL_DESCRIPTIONS but was missing from
_CORE_COMMAND_TEMPLATE_ORDER, so it sorted with the fallback rank. Add it
after 'implement' to keep core-command ordering consistent across
integrations.

Addresses review feedback on #3001.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* docs: make converge findings example neutral

Replace the self-referential sample evidence text in the Convergence
Findings table with a neutral placeholder so agents are less likely to copy
nonsensical template-specific findings into real output.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* Potential fix for pull request finding

Co-authored-by: Copilot Autofix powered by AI <175728472+Copilot@users.noreply.github.com>

* docs: clarify converge scope and hook outcome wording

- Remove FR-specific parenthetical from code-scope rule so it doesn't imply
  a hard FR-001 reference exists in every feature
- Replace unsupported 'pass outcome to hook context' instruction with explicit
  in-session outcome reporting before hook listing

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* docs: align converge task example with tasks format

Use  (no colon) in the convergence task example so it
matches tasks-template formatting and downstream expectations.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* Clarification of usage

Co-authored-by: Copilot Autofix powered by AI <175728472+Copilot@users.noreply.github.com>

* Potential fix for pull request finding

Co-authored-by: Copilot Autofix powered by AI <175728472+Copilot@users.noreply.github.com>

* docs: align converge phase/task-id format with tasks template

- Use  (colon) for consistency with tasks template
- Clarify appended task IDs must be zero-padded ( style)
- Update checklist example to a concrete zero-padded ID ()

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* docs: standardize converge phase heading format

Use  consistently in converge.md (including the
append-only contract section) to match Step 7 and tasks template style.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

---------

Co-authored-by: Copilot Autofix powered by AI <175728472+Copilot@users.noreply.github.com>
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
 2026-06-17 14:47:00 -05:00
Seiya Kojima
811a3aa447 fix(skills): preserve non-ASCII characters in skill frontmatter (#2917) 
* fix(skills): preserve non-ASCII chars in skill frontmatter

Skill SKILL.md frontmatter descriptions containing non-ASCII
characters were escaped to \uXXXX / \xXX sequences because
yaml.safe_dump() was called without allow_unicode=True.

- Add allow_unicode=True to the 7 skill/command frontmatter
  safe_dump sites (extensions, presets, claude integration)
- Add regression tests for the render and extension-install paths

Follows the approach of #1936; encoding="utf-8" is already set on
the affected write paths, so no encoding change is needed here.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* refactor(_utils): add dump_frontmatter helper

Centralize skill/command frontmatter YAML serialization into a single
_utils.dump_frontmatter helper so no call site can drop allow_unicode or
diverge on formatting. Route the 7 existing sites through it and drop a
now-unused local yaml import.

Switch the extension test fixtures to yaml.safe_dump for parity with the
production safe-dump/safe-load codepaths.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>
 2026-06-17 07:57:54 -05:00
Copilot
927f54feea feat: make git extension opt-in and remove --no-git at v0.10.0 (#2873) 
* feat(init)!: make git extension opt-in and remove --no-git at v0.10.0

- Remove --no-git parameter from specify init command
- Remove git extension auto-installation from init flow
- Git repository initialization (git init) still runs when git is available
- Remove --no-git from all test invocations across the test suite
- Update docs to reflect opt-in git extension behavior
- Replace TestGitExtensionAutoInstall with TestGitExtensionOptIn tests

BREAKING CHANGE: specify init no longer auto-installs the git extension.
Use `specify extension add git` to install it explicitly.
The --no-git flag has been removed.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* refactor(scripts): remove git operations from core scripts

Git functionality is now entirely managed by the git extension.
Core scripts only handle directory-based feature creation and numbering.

- Remove has_git(), check_feature_branch(), git branch creation from core
- Simplify number detection to use only spec directory scanning
- Remove HAS_GIT output from get_feature_paths()
- Remove git remote fetching and branch querying
- Keep BRANCH_NAME output key for backward compatibility

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* refactor: remove all git operations from core

- Remove is_git_repo() and init_git_repo() dead code from _utils.py
- Remove --branch-numbering from init command
- Remove git from 'specify check' (now extension-only)
- Update docs: git is optional prerequisite, check command description
- Fix tests to reflect no-git-in-core reality (fallback to main)

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* refactor(scripts): remove directory scanning and branch fallback from core

Core scripts now resolve feature context exclusively from:
1. SPECIFY_FEATURE env var (set by git extension)
2. .specify/feature.json (persisted by specify command)

Removed find_feature_dir_by_prefix() and directory scanning heuristics —
these are the git extension's responsibility. Scripts error clearly when
no feature context is available.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* feat: introduce feature_numbering, deprecate branch_numbering in init-options

- specify command template now reads feature_numbering (preferred) with
  fallback to branch_numbering (deprecated) from init-options.json
- Git extension reads git-config.yml > feature_numbering > branch_numbering
- init now writes feature_numbering: sequential to init-options.json
- Deprecation warning emitted when branch_numbering is used as fallback

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* fix: remove trailing whitespace in common.ps1

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* feat(scripts): persist SPECIFY_FEATURE_DIRECTORY env var to feature.json

When SPECIFY_FEATURE_DIRECTORY is set, get_feature_paths() now writes the
value to .specify/feature.json so future sessions without the env var can
still resolve the feature directory. The write is idempotent — it skips
when the file already contains the same value.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* fix: address review feedback — error messages and docs

- Update error messages in common.sh and common.ps1 to reference
  SPECIFY_FEATURE_DIRECTORY instead of SPECIFY_FEATURE (which no longer
  resolves feature directories)
- Fix get_current_branch comment (returns empty string, not error)
- Update upgrade.md to reference SPECIFY_FEATURE_DIRECTORY with correct
  example paths
- Update local-development.md troubleshooting: replace stale 'Git step
  skipped' row with actionable git extension guidance

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* fix(scripts): harden feature.json persistence

- Use json_escape in printf fallback when jq is unavailable (common.sh)
- Replace utf8NoBOM encoding with UTF8Encoding($false) for PowerShell
  5.1 compatibility (common.ps1)

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* refactor(scripts): remove dead feature_json_matches_feature_dir functions

These guards are no longer needed since the branch-name validation they
protected against has been removed from check-prerequisites.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* refactor(git-ext): rename create-new-feature to create-new-feature-branch

The git extension's script only creates the git branch — rename it to
reflect that responsibility. The core create-new-feature.sh/.ps1 handles
feature directory creation and feature.json persistence.

Also includes fixes from review feedback:
- common.sh: _persist_feature_json uses json_escape fallback
- common.ps1: Save-FeatureJson uses UTF8Encoding for PS 5.1 compat
- common.ps1: case-sensitive path stripping on non-Windows
- create-new-feature.sh/ps1: output both SPECIFY_FEATURE and
  SPECIFY_FEATURE_DIRECTORY
- setup-tasks.sh: fix stale 'Validate branch' comment

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* fix(tests): update references to renamed git extension scripts

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* fix(tests): remove duplicate EXT_CREATE_FEATURE assignments

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

---------

Co-authored-by: Manfred Riem <mnriem@users.noreply.github.com>
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
 2026-06-09 06:13:07 -05:00
Copilot
7106858c4e feat!: remove legacy --ai, --ai-commands-dir, and --ai-skills flags (0.10.0) (#2872) 
* Initial plan

* feat!: remove legacy --ai, --ai-commands-dir, and --ai-skills flags at 0.10.0

* refactor(tests): rename stale test_ai_help_* methods to test_agent_config_*

* fix: address review — derive agent folder for generic integration and remove redundant test

- Security notice now falls back to integration_parsed_options['commands_dir']
  when AGENT_CONFIG folder is None (generic integration).
- Remove test_agent_config_includes_kiro_cli which duplicates the assertion
  in test_runtime_config_uses_kiro_cli_and_removes_q.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* docs: scrub all remaining --ai flag references from source and tests

- Remove dead AI_ASSISTANT_ALIASES, AI_ASSISTANT_HELP, and
  _build_ai_assistant_help() from _agent_config.py
- Update comments/docstrings in extensions.py, presets.py, and
  integration subpackages to reference 'skills mode' or
  '--integration' instead of the removed flags
- Fix catalog.json generic integration description
- Update test docstrings/comments in test_extension_skills.py,
  test_extensions.py, and test_presets.py

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* test: remove legacy --ai flag rejection tests

The flags are fully removed from the CLI; typer handles unknown options
generically. No custom rejection logic exists to test.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* revert: remove manual CHANGELOG.md entry

CHANGELOG is generated automatically; manual edits should not be made.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* fix: make generic catalog description self-explanatory

Include the required --commands-dir sub-option in the description so
readers don't need to look up integration docs.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* fix(tests): rename duplicate test classes to avoid shadowing

The rename from Test*AutoPromote to Test*Integration collided with the
existing Test*Integration(SkillsIntegrationTests) base classes, causing
the shared test suites to be silently overwritten. Rename the CLI init
flow classes to Test*InitFlow instead.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

---------

Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com>
Co-authored-by: Manfred Riem <mnriem@users.noreply.github.com>
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
 2026-06-05 14:56:28 -05:00
Eldar Shlomi
39921ddd3b fix(shared-infra): record skipped files in speckit.manifest.json (#2483) 
* fix(shared-infra): record skipped files in speckit.manifest.json

`install_shared_infra` skipped files that already existed on disk
when `force=False`, but the skip branches in both the scripts loop
and the templates loop only appended to `skipped_files` without
calling `manifest.record_existing`. So when the function ran with a
fresh manifest against an already-populated `.specify/` tree (e.g.
after the manifest was deleted, corrupted, or extracted out of band),
every file went down the skip path, `planned_copies` /
`planned_templates` stayed empty, and `manifest.save()` wrote an
empty `files` field — leaving the integration believing nothing was
installed.

Record every skipped file in the manifest, but only when it is not
already tracked. This preserves the original hash for files that
were previously recorded so `check_modified()` (used by
`integration use` to decide whether a user has customized a
template) keeps working correctly.

Add `TestSpeckitManifestRecordsSkippedFiles` in
`tests/integrations/test_integration_claude.py` covering both the
fresh-skip path and the recover-after-lost-manifest path.

Fixes #2107

* fix(shared-infra): guard manifest.record_existing against non-file dst

Address Copilot review feedback on PR #2483. The previous fix called
``manifest.record_existing(rel_skip)`` from the skip branch of both
loops in ``install_shared_infra``, which would crash with
``IsADirectoryError`` (or another ``OSError``) if a directory or other
non-regular-file happened to exist at the expected destination path —
since ``record_existing`` opens the file to compute its SHA-256.

Three coordinated fixes:

1. ``IntegrationManifest.record_existing`` now validates its
   precondition: it raises ``ValueError`` if the path is a symlink or
   is not a regular file. The docstring already promised "an
   already-existing file"; this enforces it. The symlink check runs on
   the un-resolved path because ``_validate_rel_path`` calls
   ``resolve()``, which would silently follow the symlink. Mirrors the
   existing ``_ensure_safe_manifest_destination`` precedent in the
   same module.

2. In ``install_shared_infra``'s scripts and templates skip branches,
   guard the ``record_existing`` call with ``dst.is_file()`` and wrap
   it in ``try/except (OSError, ValueError)``. A directory collision,
   permission error, or TOCTOU race no longer aborts the whole
   install — the user gets a per-path warning, the path still
   surfaces in ``skipped_files``, and the rest of the install
   continues.

3. ``_read_manifest_files`` in the regression test no longer falls
   back to ``data.get("_files")`` (Copilot's low-confidence finding):
   the silent fallback could mask a schema regression where the
   public ``files`` key is renamed. It now asserts ``"files" in data``
   and that the value is a dict.

Add two regression tests in ``TestSpeckitManifestRecordsSkippedFiles``
covering the directory-at-destination edge case for both the scripts
loop and the templates loop. Both verify (a) install does not crash,
(b) the non-file path is not recorded in the manifest, and (c) the
path still surfaces in the user-visible warning.

The "shared infrastructure file(s)" warning text is changed to
"path(s)" so it remains accurate when non-file entries appear in the
list.

Refs #2107

* fix(manifest): lexical pre-check for record_existing + add error-case tests

Address Copilot review (2026-05-11, review id 4266902103):

1. `record_existing` was calling `(self.project_root / rel).is_symlink()`
   BEFORE validating containment. For absolute paths or paths containing
   `..`, this performed a filesystem stat outside the project root before
   `_validate_rel_path()` raised. Add a cheap lexical pre-check that
   delegates to `_validate_rel_path()` for the canonical error messages,
   so the symlink stat only ever runs on paths that are already lexically
   inside the project root.

2. Add focused unit tests in `tests/integrations/test_manifest.py` for
   the symlink and non-regular-file error paths, including:
     - symlink target rejection
     - dangling symlink rejection (caught by the symlink guard before
       the is_file check)
     - directory path rejection (is_file == False)
     - missing-path rejection (is_file == False)
     - absolute-path lexical pre-check
   The Copilot reviewer noted these guards had no focused coverage in
   `test_manifest.py`, only via the `test_integration_claude.py`
   regression test.

3. The third Copilot finding (repeated `dict(self._files)` copies via
   `manifest.files` in the skip branches) is already resolved on this
   branch by using `prior_hashes` — the function-scope snapshot taken at
   the top of `install_shared_infra` — for the membership check, instead
   of `manifest.files`.

AI disclosure: drafted with assistance from Claude (Opus 4.7).

* fix(manifest): track recovered files separately + symlink-ancestor + canonical-path guards

Address Copilot review id 4309888722 (2026-05-18) on PR #2483:

1. Recovery semantics (shared_infra.py:371, 412) — install_shared_infra
   now passes ``recovered=True`` when re-recording a skipped existing
   file. This flag funnels into a new ``recovered_files`` array in the
   manifest JSON, so a future ``refresh_managed`` run can distinguish
   "hash I produced" from "hash I observed on a file that may be a user
   customization" and avoid silent overwrite without ``--refresh-shared-infra``.
   Schema is purely additive: ``files: dict[str, str]`` is unchanged; the
   new ``recovered_files: list[str]`` is omitted when empty.

2. Symlinked ancestor (manifest.py:172) — ``record_existing`` now walks
   every component of the rel path and rejects any symlinked ancestor,
   not just a symlinked leaf. Catches ``linked_dir/file.txt`` where
   ``linked_dir`` is a symlink, which previously slipped past the leaf-only
   ``is_symlink()`` check and was resolved through by ``_validate_rel_path``.
   Mirrors the component-walk pattern in ``_ensure_safe_manifest_directory``.

3. Misleading "escapes project root" message (manifest.py:168) — paths
   like ``dir/../file.txt`` normalize inside the project, so the old
   message lied about what was wrong. New message: "Manifest paths must
   be canonical; '..' segments are not allowed". Still rejects (canonical
   keys are required so ``check_modified``/``uninstall`` cannot key the
   same file under two paths).

Tests: 7 new test methods across TestManifestRecoveredFiles and
TestRecordExistingNewGuards covering all 4 Copilot findings. Full suite
passes locally.

🤖 AI disclosure: drafted with assistance from Claude (Opus 4.7).

* fix(manifest): normalize is_recovered input through _validate_rel_path

Address Copilot review comment id 4309888722 round-5 (2026-05-21) on PR #2483:

``is_recovered()`` previously checked ``self._recovered_files`` membership
with bare ``Path(rel).as_posix()``, while ``record_existing()`` stores keys
via ``_validate_rel_path(rel, root).relative_to(root).as_posix()``. The two
normalizations disagreed on absolute paths and paths that escape the
project root — ``is_recovered`` would silently return False for inputs that
``record_existing`` would have refused entirely.

The fix routes ``is_recovered`` through the same ``_validate_rel_path``
pipeline; ``ValueError`` from the validator is caught and converted to
False so query semantics stay exception-free (Python ``__contains__``
convention).

Tests: 2 new methods in ``TestManifestRecoveredFiles``:
- ``test_is_recovered_absolute_path_returns_false``
- ``test_is_recovered_escaping_path_returns_false``

🤖 AI disclosure: drafted with assistance from Claude (Opus 4.7).

* fix(manifest): clear recovered marker on managed re-record + reject '..' in is_recovered

Address Copilot Round-7 review comments on PR #2483:

1. record_existing(recovered=False) and record_file now BOTH discard the
   path from _recovered_files. The marker is meant to flag "we observed
   this file but cannot vouch it's a managed baseline" — once the same
   path is re-recorded as managed (either explicitly or by writing fresh
   bytes), the marker is stale and must clear so refresh_managed and
   future is_recovered queries return the truthful answer.

2. is_recovered now applies the same canonical-key guard as record_existing
   (rejects absolute paths and '..' segments lexically before delegating
   to _validate_rel_path). Such paths can never be stored keys, so the
   query correctly returns False without depending on _validate_rel_path
   semantics that diverged from record_existing's stricter contract.

record_file docstring updated to mention the side-effect on recovered
markers.

Tests: 3 new methods in TestManifestRecoveredFiles covering
record_existing(false) clearing, record_file clearing, and is_recovered
dotdot rejection.

* test(manifest): update is_recovered comments to reflect Round-7 lexical guard

Round 8 — addresses Copilot review comment on tests/integrations/test_manifest.py:362.

After Round-7 (1dbf0c2), is_recovered() rejects absolute paths and '..' segments
up front via a lexical guard, returning False without calling _validate_rel_path
at all. The test comments still described the prior "_validate_rel_path raises;
we catch" code path, which is misleading for readers.

Updated comments in both:
  - test_is_recovered_absolute_path_returns_false (Copilot's exact target)
  - test_is_recovered_escaping_path_returns_false (same comment-class issue;
    fixed preemptively to avoid a Round-9 finding on the same drift)

Pure documentation change. Test assertions and behavior unchanged; all manifest
tests still green.

* fix(manifest): document OS errors on record_existing + filter orphan recovered_files on load

Round 9 — addresses Copilot review on PR #2483:

1. record_existing's docstring now documents OSError/PermissionError as
   possible raises (in addition to ValueError) — the implementation has
   always been able to raise them from is_symlink, is_file, or the
   file-read used to hash, but the contract did not reflect that.
   Callers should be prepared for both surfaces.

2. load() now filters recovered_files entries that don't correspond to
   keys in files. An externally-edited or partially-corrupted manifest
   can deserialize with orphan recovered paths; rather than reject the
   whole manifest (too strict on the upgrade path), we drop the orphans
   and let the inconsistency self-correct on the next save(). is_recovered
   then returns the truthful False for the orphan.

Tests: new test_load_filters_recovered_files_not_in_files asserting an
orphan recovered entry is dropped on load.
 2026-06-02 08:06:31 -05:00
Puneet Dixit
5a678c552e Share skills hook note post-processing (#2679) 
* fix(integrations): share skills hook note post-processing

* fix(integrations): tighten skill post-processing

Apply skill content post-processing before the initial write, use an exact hook-note sentinel for idempotence, and route Copilot skill post-processing through the shared helper before adding mode frontmatter.

* Make hook note injection per instruction

* Deduplicate Codex hook note processing

---------

Co-authored-by: Puneet Dixit <236133619+puneetdixit200@users.noreply.github.com>
Co-authored-by: Puneet Dixit <puneetdixit200@users.noreply.github.com>
 2026-05-28 09:08:48 -05:00
darion-yaphet
7f33dca87c refactor: create commands/ package and move init handler (PR-4/8) (#2615) 
* refactor: create commands/ package and move init handler (PR-4/8)

- Extract agent configuration constants (AGENT_CONFIG, AI_ASSISTANT_HELP,
  SCRIPT_TYPE_CHOICES, etc.) to _agent_config.py to avoid circular imports
- Create commands/ package skeleton with stub modules for each command group
- Move init command handler (~670 lines) from __init__.py to commands/init.py
  using the register(app) pattern; lazy imports inside the handler body
  prevent circular dependencies with __init__.py
- Re-export AGENT_CONFIG, AI_ASSISTANT_HELP, SCRIPT_TYPE_CHOICES from
  __init__.py for backward compatibility
- Add tests/test_commands_package.py to verify package structure

* fix(tests): update patch targets after moving init handler to commands/init.py

_stdin_is_interactive and select_with_arrows are now bound in
specify_cli.commands.init, not specify_cli directly.

* fix(lint): remove unused imports and mark re-exports in __init__.py

- Remove shutil, shlex top-level imports (used lazily inside functions)
- Remove rich.live.Live import (moved to commands/init.py)
- Mark select_with_arrows and _locate_bundled_workflow as explicit
  re-exports to satisfy ruff F401

* chore: add from __future__ import annotations to new modules

Aligns with the project convention established in _console.py, _assets.py,
_utils.py, and other modules.

* docs(cli): align init help with bundled scaffolding

Potential fix for pull request finding

Update command package documentation and init help text to reflect the current implementation: init uses bundled assets and integration setup, while placeholder command modules are import anchors until extracted. Remove the unused tracker-active flag assignment that had no reader in the codebase.

Constraint: --offline is hidden/no-op and init no longer downloads templates from GitHub releases

Rejected: Add no-op register functions to placeholder modules | would imply extracted command groups are implemented there

Confidence: high

Scope-risk: narrow

Directive: Keep CLI help text aligned with the actual init scaffolding path

Tested: uv run specify init --help; uv run pytest tests/test_commands_package.py tests/test_agent_config_consistency.py -q; uv run pytest tests/test_commands_package.py tests/test_console_imports.py tests/integrations/test_cli.py -q

Not-tested: full test suite

* fix(init): align preset failure reporting with _print_cli_warning helper

Use the _print_cli_warning helper (introduced in main) for preset install
failures so that output matches the expected format:
  "Failed to install preset '<name>': ..."
  "Continuing without the optional preset."

* fix(init): remove unused lazy imports

The init command imported CLI error formatting helpers through its circular-dependency-safe lazy import block, but the module does not use them. Remove those imports so ruff does not report F401.

Constraint: uvx ruff check src/ must pass.

Rejected: Wire the helpers into init error handling | Existing preset warnings already use _print_cli_warning, and changing behavior is unnecessary for this lint fix.

Confidence: high

Scope-risk: narrow

Directive: Keep lazy import blocks limited to names consumed in the importing module.

Tested: uvx ruff check src/

Not-tested: Full pytest suite

Co-authored-by: OmX <omx@oh-my-codex.dev>

---------

Co-authored-by: OmX <omx@oh-my-codex.dev>
 2026-05-26 08:06:35 -05:00
Chao Z
9735145289 fix(codex): inject dot-to-hyphen hook command note in Codex skills (#2503) 
* fix(codex): inject dot-to-hyphen hook command note in Codex skills

Hook commands in `.specify/extensions.yml` use dotted ids like
`speckit.git.commit`, but Codex skills are named with hyphens
(`speckit-git-commit`). The Claude integration handles this via an
explicit instruction injected into each generated SKILL.md by
`ClaudeIntegration.post_process_skill_content`, but the Codex
integration had no such override, so Codex would emit
`/speckit.git.commit` (which does not resolve) instead of
`/speckit-git-commit`.

This adds the same `_inject_hook_command_note` helper and a
`post_process_skill_content` override to `CodexIntegration`, plus a
small `setup()` override that applies the post-process to each
generated SKILL.md (mirroring the pattern in `ClaudeIntegration`).

Also widens the existing
`test_non_claude_post_process_is_identity` test to use `agy`
(another `SkillsIntegration` with no override), since asserting
identity behavior on Codex would now incorrectly fail.

Tests:
- New `TestCodexHookCommandNote` class mirrors
  `TestClaudeHookCommandNote`: setup-level injection, no-op when
  no hook block is present, idempotency, and indentation
  preservation.
- `pytest tests/` → 2866 passed, 34 skipped.

Signed-off-by: Chao Zhang <1175468+picklebento@users.noreply.github.com>

* fix(codex): handle empty eol when instruction is final line without newline

The hook-note injection regex allowed end-of-string matches via ``$``,
which left the captured ``eol`` empty. When the matched indent was also
empty, the substitution concatenated the note onto the same line as the
instruction. Default ``eol`` to ``\n`` when the capture is empty.

Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>

---------

Signed-off-by: Chao Zhang <1175468+picklebento@users.noreply.github.com>
Co-authored-by: Claude Opus 4.7 <noreply@anthropic.com>
 2026-05-20 09:04:47 -05:00
Andrii Furmanets
2d5e63005d fix: default non-interactive init to copilot integration (#2414) 
* fix: default non-interactive init integration

* chore: clarify non-interactive init default integration

* Address non-interactive init review feedback

* Fix interactive init test after fallback
 2026-05-06 12:48:50 -05:00
Manfred Riem
52c0a5f88f fix: resolve command references per integration type (dot vs hyphen) (#2354) 
* fix: resolve command references per integration type (dot vs hyphen)

Replace hardcoded /speckit.<cmd> references in templates with
__SPECKIT_COMMAND_<NAME>__ placeholders that are resolved at
setup time based on the integration type:

- Markdown/TOML/YAML agents: separator='.' → /speckit.plan
- Skills agents: separator='-' → /speckit-plan

Changes:
- Add resolve_command_refs() static method to IntegrationBase
- Add invoke_separator class attribute (.  for base, - for skills)
- Wire into process_template() as step 8
- Update _install_shared_infra() to process page templates
- Replace /speckit.* in 5 command templates and 3 page templates
- Add unit tests for resolve_command_refs (positive + negative)
- Add integration tests verifying on-disk content for all agents
- Add end-to-end CLI tests for Claude (skills) and Copilot (markdown)

Fixes #2347

* review: use effective_invoke_separator() for Copilot skills mode

Address PR review feedback: instead of bleeding _skills_mode
knowledge into the CLI layer, add effective_invoke_separator()
method to IntegrationBase that accepts parsed_options.

CopilotIntegration overrides it to return "-" when skills
mode is requested. The CLI layer simply asks the integration
for its separator — no hasattr or _skills_mode coupling.

Also adds tests for the new method on both base and Copilot,
plus an end-to-end test for 'specify init --integration copilot
--integration-options --skills' verifying page templates get
hyphen refs.

* fix: build_command_invocation preserves full suffix for extension commands

Previously rsplit('.', 1)[-1] on 'speckit.git.commit' yielded
just 'commit', producing /speckit.commit instead of
/speckit.git.commit (or /speckit-git-commit for skills).

Fix: strip only the 'speckit.' prefix when present, then join
remaining segments with the appropriate separator.

Updated in IntegrationBase, SkillsIntegration, and
CopilotIntegration. Added tests for extension commands in
build_command_invocation across all three.

* fix: Copilot dispatch_command() preserves full extension command suffix

dispatch_command() had the same rsplit('.', 1)[-1] bug as
build_command_invocation() — speckit.git.commit would dispatch
as /speckit-commit instead of /speckit-git-commit in skills
mode, or --agent speckit.commit instead of speckit.git.commit
in default mode.
 2026-04-24 10:04:14 -05:00
Ayesha Khalid
b4c4e86cbc fix(integrations): strip UTF-8 BOM when reading agent context files (#2283) 
* fix(integrations): strip UTF-8 BOM when reading agent context files

* test(integrations): add BOM regression tests for context file read/write

* test(workflows): mock shutil.which in tests that assume CLI is absent

* test(integrations): remove unused manifest variable in BOM test
 2026-04-20 16:00:20 -05:00
Manfred Riem
fc3d1244c0 fix: replace shell-based context updates with marker-based upsert (#2259) 
* Replace shell-based context updates with marker-based upsert

Replace ~3500 lines of bash/PowerShell agent context update scripts
with a Python-based approach using <!-- SPECKIT START/END --> markers.

IntegrationBase now manages the agent context file directly:
- upsert_context_section(): creates or updates the marked section at
  init/install/switch time with a directive to read the current plan
- remove_context_section(): removes the section at uninstall, deleting
  the file only if it becomes empty
- __CONTEXT_FILE__ placeholder in command templates is resolved per
  integration so the plan command references the correct agent file
- context_file is persisted in init-options.json for extension access

The plan command template instructs the LLM to update the plan
reference between the markers in the agent context file.

Removed:
- scripts/bash/update-agent-context.sh (857 lines)
- scripts/powershell/update-agent-context.ps1 (515 lines)
- 56 integration wrapper scripts (update-context.sh/.ps1)
- templates/agent-file-template.md
- agent_scripts frontmatter key and {AGENT_SCRIPT} replacement logic
- update-context reference from integration.json
- tests/test_cursor_frontmatter.py (tested deleted scripts)

Added:
- upsert/remove context section methods on IntegrationBase
- __CONTEXT_FILE__ placeholder support in process_template()
- context_file field in init-options.json (init/switch/uninstall)
- Per-integration tests: context file correctness, plan reference,
  init-options persistence (78 new context_file tests)
- End-to-end CLI validation across all 28 integrations

* fix: search for end marker after start marker in context section methods

Address Copilot review: content.find(CONTEXT_MARKER_END) searched from
the start of the file rather than after the located start marker. If
the file contained a stray end marker before the start marker, the
wrong slice could be replaced.

Now both upsert_context_section() and remove_context_section() pass
start_idx as the second argument to find() and validate end_idx >
start_idx before performing the replacement.

* fix: address Copilot review feedback on context section handling

1. Fix grammar in _build_context_section() directive text — add commas
   for a complete sentence.

2. Resolve __CONTEXT_FILE__ in resolve_skill_placeholders() — skills
   generated via extensions/presets for codex/kimi now replace the
   placeholder using the context_file value from init-options.json.

3. Handle Cursor .mdc frontmatter — when creating a new .mdc context
   file, prepend alwaysApply: true YAML frontmatter so Cursor
   auto-loads the rules.

4. Fix empty-file leading newline — when the context file exists but
   is empty, write the section directly instead of prepending a blank
   line.

* fix: address second round of Copilot review feedback

1. Ensure .mdc frontmatter on existing files — upsert_context_section()
   now checks for missing YAML frontmatter on .mdc files during updates
   (not just creation), so pre-existing Cursor files get alwaysApply.

2. Guard against context_file=None — use 'or ""' instead of a default
   arg so explicit null values in init-options.json don't cause a
   TypeError in str.replace().

3. Clean up .mdc files on removal — remove_context_section() treats
   files containing only the Speckit-generated frontmatter block as
   empty, deleting them rather than leaving orphaned frontmatter.

* fix: address third round of Copilot review feedback

1. CRLF-safe .mdc frontmatter check — use lstrip().startswith('---')
   instead of startswith('---\n') so CRLF files don't get duplicate
   frontmatter.

2. CRLF-safe .mdc removal check — normalize line endings before
   comparing against the sentinel frontmatter string.

3. Call remove_context_section() during integration_uninstall() — the
   manifest-only uninstall was leaving the managed SPECKIT markers
   behind in the agent context file.

4. Fix stale docstring — remove 'agent_scripts' mention from
   test_lean_commands_have_no_scripts().

* fix: address fourth round of Copilot review feedback

1. Remove unused script_type parameter from _write_integration_json()
   and all 3 call sites — the parameter was no longer referenced after
   the update-context script removal.

2. Fix _build_context_section() docstring — correct example path from
   '.specify/plans/plan.md' to 'specs/<feature>/plan.md'.

3. Improve .mdc frontmatter-only detection in remove_context_section()
   — use regex to match any YAML frontmatter block (not just the exact
   Speckit-generated one), so .mdc files with additional frontmatter
   keys are also cleaned up when no body content remains.

* fix: handle corrupted markers and parse .mdc frontmatter robustly

1. Handle partial/corrupted markers in upsert_context_section() —
   if only the START marker exists (no END), replace from START
   through EOF. If only the END marker exists, replace from BOF
   through END. This keeps upsert idempotent even when a user
   accidentally deletes one marker.

2. Parse .mdc YAML frontmatter properly — new _ensure_mdc_frontmatter()
   helper parses existing frontmatter and ensures alwaysApply: true is
   set, rather than just checking for the --- delimiter. Handles
   missing frontmatter, existing frontmatter without alwaysApply, and
   already-correct frontmatter.

* fix: preserve .mdc frontmatter, add tests, clean up on switch

1. Rewrite _ensure_mdc_frontmatter() with regex — preserves comments,
   formatting, and custom keys in existing frontmatter instead of
   destructively re-serializing via yaml.safe_dump(). Inserts or
   fixes alwaysApply: true in place.

2. Add 6 focused .mdc frontmatter tests to cursor-agent test file:
   new file creation, missing frontmatter, preserved custom keys,
   wrong alwaysApply value, idempotent upserts, removal cleanup.

3. Call remove_context_section() during integration switch Phase 1 —
   prevents stale SPECKIT markers from being left in the old
   integration's context file. Also clear context_file from
   init-options during the metadata reset.

* fix: remove unused MDC_FRONTMATTER, preserve inline comments, normalize bare CR

1. Remove unused MDC_FRONTMATTER class variable — dead code after
   _ensure_mdc_frontmatter() was rewritten with regex.

2. Preserve inline comments when fixing alwaysApply — the regex
   substitution now captures trailing '# comment' text and keeps it.

3. Normalize bare CR in upsert_context_section() — match the
   behavior of remove_context_section() which already normalizes
   both CRLF and bare CR.

4. Clarify .mdc removal comment — 'treat frontmatter-only as empty'
   instead of misleading 'strip frontmatter'.

* fix: handle corrupted markers in remove, CRLF-safe end-marker consumption

1. Handle corrupted markers in remove_context_section() — mirror
   upsert's behavior: start-only removes start→EOF, end-only removes
   BOF→end. Previously bailed out leaving partial markers behind.

2. CRLF-safe end-marker consumption — both upsert and remove now
   handle \r\n after the end marker, not just \n. Prevents extra
   blank lines at replacement boundaries in CRLF files.

3. Clarify path rule in plan template — distinguish filesystem
   operations (absolute paths) from documentation/agent context
   references (project-relative paths).

* fix: only remove context section when both markers are well-ordered

remove_context_section() previously treated mismatched markers as
corruption and aggressively removed from BOF→end-marker or
start-marker→EOF, which could delete user-authored content if only
one marker remained. Now it only removes when both START and END
markers exist and are properly ordered, returning False otherwise.
 2026-04-17 13:57:51 -05:00
Manfred Riem
8fc2bd3489 fix: allow Claude to chain skills for hook execution (#2227) 
* fix: allow Claude to chain skills for hook execution (#2178)

- Set disable-model-invocation to false so Claude can invoke extension
  skills (e.g. speckit-git-feature) from within workflow skills
- Inject dot-to-hyphen normalization note into Claude SKILL.md hook
  sections so the model maps extension.yml command names to skill names
- Replace Unicode checkmark with ASCII [OK] in auto-commit scripts to
  fix PowerShell encoding errors on Windows
- Move Claude-specific frontmatter injection to ClaudeIntegration via
  post_process_skill_content() hook on SkillsIntegration, wired through
  presets and extensions managers
- Add positive and negative tests for all changes

Fixes #2178

* refactor: address PR review feedback

- Preserve line-ending style (CRLF/LF) in _inject_hook_command_note
  instead of always inserting \n, matching the convention used by other
  injection helpers in the same module.

- Extract duplicated _post_process_skill() from extensions.py and
  presets.py into a shared post_process_skill() function in agents.py.
  Both modules now import and call the shared helper.

* fix: match full hook instruction line in regex

The regex in _inject_hook_command_note only matched lines ending
immediately after 'output the following', but the actual template
lines continue with 'based on its `optional` flag:'. Use [^\r\n]*
to capture the rest of the line before the EOL.

* refactor: use integration object directly for post_process_skill_content

Instead of a free function in agents.py that re-resolves the
integration by key, callers in extensions.py and presets.py now
resolve the integration once via get_integration() and call
integration.post_process_skill_content() directly. The base
identity method lives on SkillsIntegration.
 2026-04-15 14:35:05 -05:00
Radu Chindris
535ddbe0d2 fix: add user-invocable: true to skill frontmatter (#2077) 
Skills were missing this field, causing them to be treated as
"managed" instead of user-invocable via /speckit-* commands.
 2026-04-03 09:33:10 -05:00
Quratulain-bilal
10be484868 feat: add argument-hint frontmatter to Claude Code commands (#1951) (#2059) 
* feat: add argument-hint frontmatter to Claude Code commands (#1951)

Inject argument-hint into YAML frontmatter for Claude agent only during
release package generation. Templates remain agent-agnostic; hints are
added on the fly in generate_commands() when agent is "claude".

Closes #1951

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

* fix: scope argument-hint injection to YAML frontmatter only

Addresses Copilot review: the awk/regex matched description: anywhere
in the file. Now both bash and PowerShell track frontmatter boundaries
(--- delimiters) and only inject argument-hint after the first
description: inside the frontmatter block.

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

* feat: add argument-hint to Claude integration + tests

- Override setup() in ClaudeIntegration to inject argument-hint into
  YAML frontmatter after description: line, scoped to frontmatter only
- Add ARGUMENT_HINTS mapping for all 9 commands
- Add tests: hint presence, correct values, frontmatter scoping,
  ordering after description, and body-safety check

Addresses maintainer feedback to cover the new integrations system
in src/specify_cli/integrations/claude/__init__.py with tests in
tests/integrations/test_integration_claude.py

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

* fix: address Copilot review feedback on Claude integration

- Remove unused `import re`
- Skip injection if argument-hint already exists in frontmatter
- Add found_description assertion to test_hint_appears_after_description
- Add test_inject_argument_hint_skips_if_already_present test

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

* refactor: delegate to super().setup() and post-process for hints

- Eliminates setup() duplication by calling super().setup() then
  post-processing command files to inject argument-hint
- Fixes EOL preservation to correctly detect \r\n vs \n
- No drift risk if MarkdownIntegration.setup() changes

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

* fix: use read_bytes/write_bytes for platform-stable EOL handling

Address Copilot review: avoid platform newline translation by using
read_bytes()/write_bytes() instead of read_text()/write_text() when
post-processing SKILL.md files for argument-hint injection.

* fix: re-record manifest hash after hint injection, quote hint values

- Re-record file hash in manifest after writing argument-hint so
  check_modified()/uninstall stays in sync
- Double-quote argument-hint values to match SKILL.md frontmatter style
- Update tests to expect quoted hint values

* fix: inject disable-model-invocation into Claude skill frontmatter

---------

Co-authored-by: Claude Sonnet 4.6 <noreply@anthropic.com>
 2026-04-03 08:57:51 -05:00
Manfred Riem
b1832c9477 Stage 6: Complete migration — remove legacy scaffold path (#1924) (#2063) 
* Stage 6: Complete migration — remove legacy scaffold path (#1924)

Remove the legacy GitHub download and offline scaffold code paths.
All 26 agents now use the integration system exclusively.

Code removal (~1073 lines from __init__.py):
- download_template_from_github(), download_and_extract_template()
- scaffold_from_core_pack(), _locate_release_script()
- install_ai_skills(), _get_skills_dir (restored slim version for presets)
- _has_bundled_skills(), _migrate_legacy_kimi_dotted_skills()
- AGENT_SKILLS_MIGRATIONS, _handle_agent_skills_migration()
- _parse_rate_limit_headers(), _format_rate_limit_error()
- Three-way branch in init() collapsed to integration-only

Config derivation (single source of truth):
- AGENT_CONFIG derived from INTEGRATION_REGISTRY (replaced 180-line dict)
- CommandRegistrar.AGENT_CONFIGS derived from INTEGRATION_REGISTRY (replaced 160-line dict)
- Backward-compat constants kept for presets/extensions: SKILL_DESCRIPTIONS,
  NATIVE_SKILLS_AGENTS, DEFAULT_SKILLS_DIR

Release pipeline cleanup:
- Deleted create-release-packages.sh/.ps1 (948 lines of ZIP packaging)
- Deleted create-github-release.sh, generate-release-notes.sh
- Deleted simulate-release.sh, get-next-version.sh, update-version.sh
- Removed .github/workflows/scripts/ directory entirely
- release.yml is now self-contained: check, notes, release all inlined
- Install instructions use uv tool install with version tag

Test cleanup:
- Deleted test_ai_skills.py (tested removed functions)
- Deleted test_core_pack_scaffold.py (tested removed scaffold)
- Cleaned test_agent_config_consistency.py (removed 19 release-script tests)
- Fixed test_branch_numbering.py (removed dead monkeypatches)
- Updated auto-promote tests (verify files created, not tip messages)

1089 tests pass, 0 failures, ruff clean.

* fix: resolve merge conflicts with #2051 (claude as skills)

- Fix circular import: move CommandRegistrar import in claude
  integration to inside method bodies (was at module level)
- Lazy-populate AGENT_CONFIGS via _ensure_configs() to avoid
  circular import at class definition time
- Set claude registrar_config to .claude/commands (extension/preset
  target) since the integration handles .claude/skills in setup()
- Update tests from #2051 to match: registrar_config assertions,
  remove --integration tip assertions, remove install_ai_skills mocks

1086 tests pass.

* fix: properly preserve claude skills migration from #2051

Restore ClaudeIntegration.registrar_config to .claude/skills (not
.claude/commands) so extension/preset registrations write to the
correct skills directory.

Update tests that simulate claude setup to use .claude/skills and
check for SKILL.md layout. Some tests still need updating for the
full skills path — 10 remaining failures from the #2051 test
expectations around the extension/preset skill registration flow.

WIP: 1076/1086 pass.

* fix: properly handle SKILL.md paths in extension update rollback and tests

Fix extension update rollback using _compute_output_name() for SKILL.md
agents (converts dots to hyphens in skill directory names). Previously
the backup and cleanup code constructed paths with raw command names
(e.g. speckit.test-ext.hello/SKILL.md) instead of the correct computed
names (speckit-test-ext-hello/SKILL.md).

Test fixes for claude skills migration:
- Update claude tests to use .claude/skills paths and SKILL.md layout
- Use qwen (not claude) for skills-guard tests since claude's agent dir
  IS the skills dir — creating it triggers command registration
- Fix test_extension_command_registered_when_extension_present to check
  skills path format

1086 tests pass, 0 failures, ruff clean.

* fix: address PR review — lazy init, assertions, deprecated flags

- _ensure_configs(): catch ImportError (not Exception), don't set
  _configs_loaded on failure so retries work
- Move _ensure_configs() before unregister loop (not inside it)
- Module-level try/except catches ImportError specifically
- Remove tautology assertion (or True) in test_extensions.py
- Strengthen preset provenance assertion to check source: field
- Mark --offline, --skip-tls, --debug, --github-token as hidden
  deprecated no-ops in init()

1086 tests pass.

* fix: remove deleted release scripts from pyproject.toml force-include

Removes force-include entries for create-release-packages.sh/.ps1
which were deleted but still referenced in [tool.hatch.build].
 2026-04-02 12:34:34 -05:00
Andrii Furmanets
a858c1d6da Install Claude Code as native skills and align preset/integration flows (#2051) 
* Use Claude skills for generated commands

* Fix Claude integration and preset skill flows

* Group Claude tests in integration suite

* Align Claude skill frontmatter across generators

* Fix native skill preset cleanup

* Keep legacy AI skills test on legacy path

* Move Claude here-mode test to CLI suite
 2026-04-02 09:44:48 -05:00
Manfred Riem
255371d367 Stage 3: Standard markdown integrations — 19 agents migrated to plugin architecture (#2038) 
* Stage 3: Standard markdown integrations — 19 agents migrated to plugin architecture

Migrate all standard markdown integrations to self-contained subpackages
under integrations/. Each subclasses MarkdownIntegration with config-only
overrides (~10 lines per __init__.py).

Integrations migrated (19):
claude, qwen, opencode, junie, kilocode, auggie, roo, codebuddy,
qodercli, amp, shai, bob, trae, pi, iflow, kiro-cli, windsurf,
vibe, cursor-agent

Changes:
- Create integrations/<key>/ subpackage with __init__.py and scripts/
  (update-context.sh, update-context.ps1) for each integration
- Register all 19 in INTEGRATION_REGISTRY (20 total with copilot)
- MarkdownIntegration.setup() processes templates (replaces {SCRIPT},
  {ARGS}, __AGENT__; strips frontmatter blocks; rewrites paths)
- Extract install_scripts() to IntegrationBase; refactor copilot to use it
- Generalize --ai auto-promote from copilot-only to registry-driven:
  any integration registered in INTEGRATION_REGISTRY auto-promotes.
  Unregistered agents (gemini, tabnine, codex, kimi, agy, generic)
  continue through the legacy --ai path unchanged.
- Fix cursor/cursor-agent key mismatch in CommandRegistrar.AGENT_CONFIGS
- Add missing vibe entry to CommandRegistrar.AGENT_CONFIGS
- Update kiro alias test to reflect auto-promote behavior

Testing:
- Per-agent test files (test_integration_<agent>.py) with shared mixin
- 1316 tests passing, 0 failures
- Complete file inventory tests for both sh and ps variants
- Byte-for-byte validated against v0.4.3 release packages (684 files)

* Address PR review: fix repo root detection and no-op test

- Fix repo root fallback in all 20 update-context.sh scripts: walk up
  from script location to find .specify/ instead of falling back to pwd
- Fix repo root fallback in all 20 update-context.ps1 scripts: walk up
  from script location to find .specify/ instead of falling back to $PWD
- Add assertions to test_setup_writes_to_correct_directory: verify
  expected_dir exists and all command files reside under it

* Fix REPO_ROOT priority: prefer .specify walk-up over git root

In monorepos the git toplevel may differ from the project root that
contains .specify/. The previous fix still preferred git rev-parse
over the walk-up result.

Bash scripts (20): prefer the discovered _root when it contains
.specify/; only accept git root if it also contains .specify/.

PowerShell scripts (20): validate git root contains .specify/ before
using it; fall back to walking up from script directory otherwise.

* Guard git call with try/catch in PowerShell scripts

With $ErrorActionPreference = 'Stop', an unguarded git rev-parse
throws a terminating CommandNotFoundException when git is not
installed, preventing the .specify walk-up fallback from running.

Wrap the git call in try/catch across all 20 update-context.ps1
scripts so the fallback works reliably without git.

* Rename hyphenated package dirs to valid Python identifiers

Rename kiro-cli → kiro_cli and cursor-agent → cursor_agent so the
packages can be imported with normal Python syntax instead of
importlib.  The user-facing integration key (IntegrationBase.key)
stays hyphenated to match the actual CLI tool / binary name.

Also reorganize _register_builtins(): imports and registrations
are now grouped alphabetically with clear section comments.

* Reuse CommandRegistrar path rewriting in process_template()

Replace the duplicated regex-based path rewriting in
MarkdownIntegration.process_template() with a call to the shared
CommandRegistrar._rewrite_project_relative_paths() implementation.

This ensures extension-local paths are preserved and boundary rules
stay consistent across the codebase.

* Promote _rewrite_project_relative_paths to public API

Rename CommandRegistrar._rewrite_project_relative_paths() to
rewrite_project_relative_paths() (drop leading underscore) so
integrations can call it without reaching into a private method
across subsystem boundaries.

Addresses PR review feedback:
https://github.com/github/spec-kit/pull/2038#discussion_r3022105627

* Broaden TestRegistrarKeyAlignment to cover all integration keys

Parametrize across ALL_INTEGRATION_KEYS instead of only checking
cursor-agent and vibe.  Keeps a separate negative test for the
stale 'cursor' shorthand.

Addresses PR review feedback:
https://github.com/github/spec-kit/pull/2038#discussion_r3022269032
 2026-04-01 09:17:21 -05:00