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12 Commits
| Author | SHA1 | Message | Date | |
|---|---|---|---|---|
thejesh23
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2537be8144 |
fix(extensions): stop env-var config leaking across prefix-colliding extension IDs (#3497)
* fix(extensions): stop env-var config leaking across prefix-colliding IDs (#3494) Because ``_`` doubles as both the separator between an extension ID and its config path AND the substitute for ``-`` inside an extension ID, an env var like ``SPECKIT_GIT_HOOKS_URL`` starts with *both* the ``SPECKIT_GIT_`` prefix of the ``git`` extension and the ``SPECKIT_GIT_HOOKS_`` prefix of a co-installed ``git-hooks`` extension. ``ConfigManager._get_env_config`` matched only on the shorter prefix, so the same env var silently surfaced inside both extensions' configs (as ``{'hooks': {'url': ...}}`` for ``git`` and ``{'url': ...}`` for ``git-hooks``). Impact: config intended for one extension leaked into another and, worse, could flip ``config.<field> is set`` hook conditions on the wrong extension. Route the env var to the extension whose normalized ID is the longest match — the more specific one. When another installed sibling's normalized ID + ``_`` claims the remainder, skip the var here. The sibling scan reads ``.specify/extensions/`` directly and degrades to a no-op if the dir is missing (fresh project / ad-hoc harness), so the pre-fix single-extension behaviour is unchanged when there is no collision. Distinct from #3350 (intra-extension prefix collision between two keys of the same extension) — this fixes the cross-extension case. Fixes #3494 * fix(extensions): source sibling scan from registry, not directory Address Copilot review on #3497: ``ExtensionManager.remove(..., keep_config=True)`` preserves the extension directory but drops the registry entry, so the previous directory-scan approach would treat a config-only leftover as an installed sibling and silently discard ``SPECKIT_<sibling>_*`` env vars into no owner. Sourced the sibling list from ``ExtensionRegistry.keys()`` — the registry is the source of truth for "installed" — and kept the same graceful ``[]`` fallback so the fresh-project / ad-hoc harness path is unaffected. Updated the ``TestConfigManagerCrossExtensionEnvLeak`` ``_install`` helper to register its fake installations and added ``test_config_only_leftover_not_treated_as_sibling`` to lock in the new behaviour for the ``keep_config=True`` scenario. Full suite: 3978 passed, 110 skipped. * fix(extensions): swallow non-UTF-8 registry in sibling scan Address Copilot follow-up on #3497: ``ExtensionRegistry._load()`` catches ``JSONDecodeError`` / ``FileNotFoundError`` but not decode failures — a registry file with invalid text encoding would surface a ``UnicodeDecodeError`` out of ``_sibling_extension_ids`` and break every config read instead of degrading to the documented pre-fix behaviour. Extend the fallback in ``_sibling_extension_ids`` to also catch ``UnicodeError`` and add ``test_non_utf8_registry_does_not_crash`` as a regression pin (kept ``_load()`` itself out of scope — that broader hardening belongs in a separate PR since it affects all readers). Full suite: 3979 passed, 110 skipped. |
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Marsel Safin
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3b7d95a408 |
fix: rewrite extension-relative subdir paths in generated command bodies (#3444)
* fix: rewrite extension-relative subdir paths in generated command bodies Extension command bodies reference bundled files relative to the extension root (agents/, knowledge-base/, templates/, ...). Generated SKILL.md and command files emitted those paths verbatim, so agents resolved them against the workspace root where they do not exist. Add CommandRegistrar.rewrite_extension_paths, which rewrites references to subdirectories that actually exist in the installed extension to .specify/extensions/<id>/..., and call it once in register_commands so every output format and alias gets the fix. commands/, specs/ and dot-directories are never rewritten. Fixes #2101 Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * fix: only rewrite relative extension path references Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * fix: use callable re.sub replacement for extension subdir rewrite subdir and extension_id come from filesystem directory names and were interpolated into a re.sub string replacement template. A directory name containing a backslash (e.g. assets\q) would raise re.error: bad escape, aborting command registration even when the body didn't reference it. Use a callable replacement so these values are treated literally. Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * fix: make subdir rewrite regression test cross-platform Renamed the test's subdir fixture from "assets\\q" to "assets[q]": on Windows, backslash is a path separator, so mkdir would create nested "assets/q" dirs instead of one literally-named directory, and iterdir() would only discover "assets", never exercising the rewrite. extension_id keeps a real backslash/"\\1" since it isn't used to create a directory, still verifying the callable replacement handles it literally. Added a sanity assertion for this assumption. Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * fix: apply extension subdir path rewrite in skills-mode renderer register_commands() rewrote extension-relative subdir references (agents/, knowledge-base/, etc.) via rewrite_extension_paths(), but _register_extension_skills() - the separate renderer used for active non-native skills agents (e.g. Claude with ai_skills: true) - never called it. Generated SKILL.md files left agents/... and knowledge-base/... unresolved, and mapped the extension's own templates/ through the generic project-level rewrite instead of its installed .specify/extensions/<id>/templates/ location. Reuse the existing rewrite_extension_paths() helper in _register_extension_skills() at the same point register_commands() applies it (before resolve_skill_placeholders' generic rewrite), and add a skills-mode regression test. Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * fix: apply extension subdir path rewrite on preset restore/reconcile paths _unregister_skills() restored extension-backed SKILL.md content via resolve_skill_placeholders() without first calling rewrite_extension_paths(), so removing a preset override that shadowed an extension command restored the bare, unresolvable agents/... and knowledge-base/... references. Carried extension_id/extension_dir through _build_extension_skill_restore_index() and applied the same rewrite used at initial registration before restoring. Found the identical gap in _reconcile_composed_commands()'s non-skill agent path: when a removed preset's command reverts to an extension winner, register_commands_for_non_skill_agents() was called without extension_id, so the rewrite never ran for plain command-file agents either. Passed extension_id through there too. Added regression tests for both restore paths (skills-mode and non-skill-agent command files) in tests/test_presets.py. Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * fix: apply extension subdir path rewrite when composing over extension base PresetResolver.resolve_content() read the effective base layer's raw content directly via path.read_text() before composing append/prepend/ wrap overlays on top of it, and its outright-replace shortcut did the same. When that base layer was extension-provided, neither read path applied rewrite_extension_paths(), so composing a preset over an extension command (or an extension winning outright through resolve_content) left bare, unresolvable agents/... and knowledge-base/... references in the composed output. All three call sites (PresetManager._register_commands()'s composed path, _reconcile_composed_commands()'s composed path, and skills-mode reading the .composed file written by either) consume resolve_content's return value, so fixing the read at its source covers command output, skill output, and both initial-install and reconcile flows without threading extension identity through each caller. Tagged extension layers in collect_all_layers() with extension_id/ extension_dir, and added a _read_layer_content() helper in resolve_content() that applies rewrite_extension_paths() whenever a layer carries that extension identity — used at both raw-read sites (outright-replace shortcut and composition base). Composing (append/prepend/wrap) layers are never extension-provided (extensions are always inserted with strategy "replace"), so no other read site needs the rewrite. Added regression tests: a parametrized resolve_content() test covering append/prepend/wrap composing over an extension base, a skills-mode test asserting the composed SKILL.md resolves the extension's subdir references, and a non-skill-agent (Gemini) install-time test matching the reported live repro. Assisted-by: GitHub Copilot (model: Claude Sonnet 5, autonomous) Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> --------- Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> |
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Ali jawwad
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e59da78677 |
fix(extensions): handle prefix-colliding env vars in _get_env_config (#3350)
* fix(extensions): handle prefix-colliding env vars in _get_env_config
_get_env_config built the nested dict with 'if part not in current:
current[part] = {}' and an unconditional leaf assignment. Two env vars
that collide on a prefix — e.g. SPECKIT_X_CONNECTION and
SPECKIT_X_CONNECTION_URL — then either crash (scalar processed first:
the walk indexes into a str -> TypeError 'str object does not support
item assignment') or silently clobber the nested dict (scalar processed
last). Via should_execute_hook's blanket except, the crash silently
disables every config-based hook for the extension. Guard the walk and
the leaf assignment with isinstance checks so a colliding scalar yields
to the nested dict; result is order-independent
({'connection': {'url': ...}} either way), matching _merge_configs'
dict-preserving semantics.
Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
* test(extensions): assert via public should_execute_hook, not private helper
Per review: the colliding-env hook test described should_execute_hook
swallowing the TypeError, but asserted on the private _evaluate_condition.
Assert on the public should_execute_hook instead — it returns False
(silently disabled) before the fix and True after, matching the
real-world failure mode and not coupling to a private helper.
Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
* fix(extensions): ignore malformed env var names in _get_env_config
Per review: a name like SPECKIT_<EXT>_ (no key) or with consecutive
underscores produced empty path components, creating surprising entries
under an empty key (env_config[''] = ...). Filter out empty parts and
skip the variable entirely when nothing remains.
Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
---------
Co-authored-by: Claude Fable 5 <noreply@anthropic.com>
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Zhiyao Wen
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1930f89d17 |
fix extension-local script path rewriting (#3364)
Co-authored-by: Zhiyao <zhiyao@ZhiyaodeMacBook-Air.local> |
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Ali jawwad
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52480ee50f |
fix(extensions): coerce non-mapping YAML config roots to {} in ConfigManager (#3345)
ConfigManager._load_yaml_config returned yaml.safe_load(...) or {}, which
only guards falsy roots — a truthy non-mapping root (a YAML list or
scalar) flows straight into _merge_configs, whose .items() raises
AttributeError. get_config()/has_value()/get_value() then crash, and via
should_execute_hook's blanket 'except Exception: return False' every
config-based hook condition for that extension is silently disabled.
Coerce a non-dict root to {}, mirroring the existing non-dict-root guard
in get_project_config(). Hardens all three call sites in one place.
Co-authored-by: Claude Fable 5 <noreply@anthropic.com>
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Noor ul ain
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f59fd81608 |
fix(extensions): resolve core-command dirs via _assets helpers (#3274) (#3287)
`_load_core_command_names()` computed its candidate command dirs with bespoke `Path(__file__)` arithmetic. The #3014 move of this module from `specify_cli/extensions.py` to `specify_cli/extensions/__init__.py` pushed the file one directory deeper but left the `.parent` counts unchanged, so both candidates resolved to non-existent paths: wheel -> specify_cli/extensions/core_pack/commands (real: specify_cli/core_pack/commands) source -> src/templates/commands (real: repo-root templates/commands) Neither exists, so every call silently fell through to `_FALLBACK_CORE_COMMAND_NAMES`. Discovery is latent-dead: the fallback happens to equal the real stems today, but the shadowing guard (#1994) that depends on it now relies on someone hand-editing the fallback on every core-command add/remove (as already happened for `converge`, #3001). Delegate path resolution to the canonical `_locate_core_pack` / `_repo_root` resolvers in `_assets` — the same ones the presets and bundle loaders use. They are anchored to the package root, so discovery survives future module moves. Add regression tests that point the resolvers at a temp tree with *different* command names, proving discovery reads from disk rather than returning the fallback (they fail on the pre-fix code). Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com> |
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Dyan Galih
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6fb7e77b3e |
fix: allow prerelease spec-kit versions in compatibility checks (#2695)
* docs: generate integrations reference from catalog * refactor: integrate table rendering into specify integration search --markdown - Remove standalone scripts/generate_integrations_reference.py - Strip doc injection machinery from catalog_docs.py; keep only table rendering - Wire render_integrations_table() into existing --markdown flag of integration search - Remove old simple markdown table block from integration_search (was Name|ID|Version|Description|Author) - Simplify tests: drop subprocess/doc-path tests, keep table rendering and metadata tests - Clean up docs/reference/integrations.md: remove generated markers, update note * fix: address Copilot review feedback on catalog_docs and integration_search - Warn when --markdown is combined with filters (query/--tag/--author) which are silently ignored; catch ValueError/FileNotFoundError and surface clean error via console instead of raw traceback (r3244821516) - Add coverage enforcement in list_integrations_for_docs(): raises ValueError with actionable message if any registry key is missing from INTEGRATION_DOC_URLS, preventing silently incomplete doc tables (r3244821589) - Rename test to accurately reflect sources: label derives from registry config, URL comes from INTEGRATION_DOC_URLS doc map — not solely from registry (r3244821607) - Simplify test dict construction to idiomatic dict comprehension (r3244821619) * fix: add sync test, INTEGRATIONS_REFERENCE_PATH constant, and fix naming * revert: restore docs/reference/integrations.md to upstream/main; remove sync test (GH Actions job will handle) * fix: remove dead INTEGRATIONS_REFERENCE_PATH, drop URL-length padding, fix docstring, drop FileNotFoundError * fix: send --markdown warnings/errors to stderr, rename test for clarity * fix: detect stale doc-map keys, test _render_cell escaping, strengthen header assertion * refactor: promote _render_cell to public render_cell function * test: mock registry and doc maps to avoid brittle live registry coupling * refactor: flatten patches, remove unused imports, fix trailing whitespace, optimize missing calculation * refactor: make validation non-fatal, fix context manager syntax, add CLI tests * fix: improve docstring clarity, test robustness, and exception handling * fix: improve test assertions, disable warnings by default, enhance exception handling * fix: make CLI tests deterministic and improve config access resilience * fix: remove extra blank line, add stale keys validation, add regression test for docs sync * Fix 5 remaining feedback items: - Rename _get_mocked_cli_runner() to _get_catalog_docs_patches() for clarity - Use ExitStack context manager for guaranteed patch cleanup - Add explicit UTF-8 encoding to file reads - Skip doc sync test gracefully when docs aren't present - Remove exception chaining from typer.Exit to avoid noisy tracebacks * address all outstanding copilot review feedback on PR 2563 * Address Copilot feedback: escape URLs in markdown links, deduplicate cell rendering, fix table parser for escaped pipes * Address 3 new Copilot feedback: add URL escaping test, fix parse_first_markdown_table for escaped pipes, guard community tests with skip * Address 3 new Copilot feedback: escape id field, remove unused alias, escape integration URLs * Address 3 new Copilot feedback: fix comment name, include all integrations in list * Fix architectural issue: escape raw fields before composing Markdown to prevent double-escaping * Deduplicate _escape_url_for_markdown_link and add URL escaping test * Address 4 new Copilot feedback: add trailing newline, fix test helper ExitStack, update warning message * Address 4 new Copilot feedback: make escape function public, fix error message, validate test rows, prevent double newline * Update error message in test_missing_catalog_file for clarity * Remove obsolete integrations sync test * keep integrations docs in sync * fix: allow prerelease spec-kit versions in compatibility checks Allow prerelease/dev builds to satisfy extension and preset compatibility checks when their version number falls within the required specifier range. Also harden the integrations docs rendering helpers and add regression coverage for the markdown table parsing and version gating paths. Tests: pytest -q; python3 -m compileall -q .; black/flake8 unavailable Reference: branch 002-generate-integrations-docs; source patch /tmp/spec-kit-changes.patch * fix: isolate prerelease compatibility gate changes Keep the prerelease/version compatibility fix on its own branch and remove the unrelated integrations docs updates that belong with PR 2563. Tests: full suite passed on the prerelease branch before splitting; docs branch covered by targeted docs tests Reference: upstream/main; source patch /tmp/spec-kit-changes.patch * Address PR 2695 feedback: Centralize prerelease policy and add boundary test * Address remaining Copilot PR feedback: revert docs and add preset prerelease tests * Remove unreachable raise CompatibilityError * Fix PEP8 E302 and E303 formatting issues |
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Si Zengyu
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1add20341d |
fix(extensions,presets,workflows): resolve private GHES release assets via /api/v3 (#3157)
* feat(auth): add github_provider_hosts() to enumerate GHES hosts from auth.json Assisted-by: Claude Code (model: claude-sonnet-4-6, autonomous) * fix(extensions): resolve GHES release assets via /api/v3 Generalizes resolve_github_release_asset_api_url to GitHub Enterprise Server hosts (gated by auth.json github hosts), fixing private GHES extension/preset downloads. github/spec-kit#3147 Assisted-by: Claude Code (model: claude-sonnet-4-6, autonomous) * fix(extensions,presets): pass auth.json github hosts into release resolver Assisted-by: Claude Code (model: claude-sonnet-4-6, autonomous) * docs(auth): document GHES private catalog + release-asset auth Assisted-by: Claude Code (model: claude-sonnet-4-6, autonomous) * fix(presets,workflows): pass auth.json github hosts into remaining release resolvers Wires preset add --from and workflow add through github_provider_hosts() so private GHES release assets resolve via /api/v3 there too. github/spec-kit#3147 Assisted-by: Claude Code (model: claude-sonnet-4-6, autonomous) * test(presets): use module-level io.BytesIO in GHES preset test Addresses Copilot review on PR #3157: drop unnecessary __import__("io") in test_preset_add_from_ghes_release_url_resolves_via_api_v3 since io is already imported at module level. * fix(github-http): pass through GHES asset API URLs by path shape Addresses Copilot review on PR #3157. A direct GHES /api/v3 release asset URL was only returned as already-resolved when its host was in the allowlist; otherwise the resolver returned None and the caller downloaded the same URL without 'Accept: application/octet-stream', fetching JSON metadata instead of the binary. Gate the passthrough on path shape alone, mirroring the github.com case. This is safe: passthrough returns the input URL unchanged and the caller fetches it either way, so no new request to an arbitrary host is induced; the token stays independently gated by auth.json in open_url. The allowlist remains the anti-SSRF gate on the tag-lookup resolving path. Add test_passthrough_for_unlisted_ghes_api_asset_url. |
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Zied Jlassi
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b042d2a843 |
feat(extensions): verify catalog archive sha256 before install (#3080)
* feat(extensions): verify catalog archive sha256 before install Extension and preset archives were downloaded over HTTPS and unpacked (with Zip-Slip protection) but their bytes were never checked against a known digest. Trust rested entirely on TLS and the integrity of the release host, so a tampered or swapped archive from a compromised third-party release would be installed silently. Maintainers do not audit extension code, so consumer-side integrity is the only available defence. Catalog entries may now pin an optional `sha256` digest. When present, the downloaded archive is verified before it is written to disk and installed; a mismatch aborts with a clear error. Entries without `sha256` keep working unchanged (a DEBUG line records that the download was unverified), so the change is backwards compatible. The check runs on both download paths (extensions and presets) via a single shared helper so the two stay in parity. - Add `verify_archive_sha256` helper in shared_infra (digest match, `sha256:` prefix, case-insensitive; DEBUG log when no digest declared) - Enforce it in ExtensionCatalog.download_extension and PresetCatalog.download_pack, before the archive is written to disk - Document the optional `sha256` field in the publishing guides - Tests: helper unit tests + matching/mismatch/no-digest on both paths Signed-off-by: Zied Jlassi <6190550+zied-jlassi@users.noreply.github.com> Assisted-by: AI * fix(extensions): harden sha256 parsing and tidy download test mocks Follow-up to the review on #3080: - shared_infra.verify_archive_sha256: strip only a literal `sha256:` algorithm prefix (case-insensitive) instead of `split(':', 1)[-1]`, which silently dropped any prefix — so `md5:<64-hex>` was accepted as if it were a valid SHA-256. Validate that the declared value is exactly 64 hex characters and raise a clear error otherwise, and compare with `hmac.compare_digest` for a constant-time check. Add tests covering a malformed digest and a non-`sha256:` prefix (both previously accepted). - Download test helpers: configure the context-manager mock via `__enter__.return_value`/`__exit__.return_value` rather than assigning a `lambda s: s`, which is clearer and independent of the invocation arity. Assisted-by: AI Signed-off-by: Zied Jlassi (Architect AI) <6190550+zied-jlassi@users.noreply.github.com> * fix(extensions): reject a declared-but-empty sha256 instead of skipping verification verify_archive_sha256 skipped on any falsy expected value, so a present-but-empty digest (e.g. sha256: "" reached via ...get("sha256")) silently disabled the integrity check instead of surfacing the authoring error. Guard on expected is None so only an absent digest skips; blank/whitespace/bare-prefix values fall through to the 64-hex validation and are rejected. Adds a regression test. Signed-off-by: Zied Jlassi <6190550+zied-jlassi@users.noreply.github.com> * docs(shared_infra): clarify _SHA256_HEX_RE accepts and normalizes uppercase The comment described the regex as matching '64 lowercase' hex characters, but verify_archive_sha256 lowercases the declared value (raw.lower()) before matching, so an uppercase digest is accepted and normalized rather than rejected. Clarify the comment to avoid misleading future readers. Addresses Copilot review feedback on shared_infra.py. Signed-off-by: Zied Jlassi <6190550+zied-jlassi@users.noreply.github.com> * test(presets): cover the no-sha256 backwards-compatible path Address Copilot review: download_pack's optional sha256 verification was tested for match/mismatch but not the backwards-compatible path where a catalog entry has no sha256 (pack_info.get("sha256") is None). Add a no-sha256 test mirroring the extensions coverage so the helper never silently becomes mandatory for presets. Signed-off-by: Zied Jlassi <6190550+zied-jlassi@users.noreply.github.com> --------- Signed-off-by: Zied Jlassi <6190550+zied-jlassi@users.noreply.github.com> Signed-off-by: Zied Jlassi (Architect AI) <6190550+zied-jlassi@users.noreply.github.com> |
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JinHyuk Sung
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0c975bbef7 |
fix: write Codex dev skills as files (#2988)
* fix: write Codex dev skills as files * fix: route codex dev symlink policy through metadata * fix: replace codex dev symlinks on refresh * fix: migrate codex dev skill symlinks * fix: avoid inactive shared skill dev symlinks * fix: preserve unrelated dev skill symlinks |
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Pascal THUET
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ce01877610 |
fix: register enabled extensions for agent on integration use/upgrade (#2949)
* fix: register enabled extensions for agent on integration install/upgrade install and upgrade only set up the integration's own core commands; only switch re-registered the enabled extensions' commands for the target agent. A second integration added via install (or refreshed via upgrade) was therefore silently missing the extension commands the existing agents already had (e.g. the bundled agent-context extension). Extract switch's registration into a shared _register_extensions_for_agent helper and call it from install and upgrade too, so every installed agent ends up with every enabled extension's commands — full parity with switch. Closes #2886 * test: pin skills-mode secondary-agent registration; document #2948 limitation Extension skill rendering is scoped to the active agent (init-options track a single ai / ai_skills pair), so a skills-mode agent registered while not active (e.g. Copilot --skills installed as a secondary integration) gets command files rather than skills. install/upgrade match extension add here; only switch renders skills, because it activates the target first. Add a regression test pinning this behavior and document the limitation on the shared helper. Per-agent skills parity is tracked separately in #2948. * fix: don't re-render the active agent's skills when registering a non-active agent register_enabled_extensions_for_agent runs an active-agent-scoped skills pass (_register_extension_skills resolves the skills dir from init-options["ai"], ignoring the passed agent). Routing install/upgrade of a secondary integration through it re-rendered the *active* skills-mode agent's extension skills as a side effect — resurrecting skill files the user had deliberately deleted. Gate the skills pass on the target being the active agent; switch is unaffected because it activates the target first. Also harden the skills-mode install test (assert a core skill so --skills is load-bearing, drop a vacuous registered_skills assertion) and add a regression test. Surfaced by review of the PR; skills parity for non-active agents stays tracked in #2948. * refactor: share the extension-op scaffold and run (un)registration post-commit Review cleanups, no behavior change on the success path: - Extract the best-effort ExtensionManager scaffold (lazy import, instantiate, except -> _print_cli_warning) into _best_effort_extension_op. Both _register_extensions_for_agent and a new _unregister_extensions_for_agent delegate to it, removing the duplicate block left inline in switch. - Invoke the best-effort extension registration AFTER the install/switch/upgrade try/except has committed, so a failure in it can never trigger the rollback (install and switch teardown on except). * docs: clarify extension registration parity scope * fix(integrations): defer extension registration until use * fix(tests): remove redundant shutil import * fix(integrations): backfill extensions for installed switch targets |
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darion-yaphet
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826e193cee |
refactor: move extension command handlers to extensions/_commands.py (PR-7/8) (#3014)
* refactor: move extension command handlers to extensions/_commands.py (PR-7/8) Convert the flat extensions.py module into an extensions/ package and extract all extension_app and catalog_app command handlers plus their private helpers (_resolve_installed_extension, _resolve_catalog_extension, _print_extension_info) out of __init__.py into the new extensions/_commands.py, mirroring the domain-dir layout used for presets/_commands.py (PR-6) and integrations/_commands.py (PR-5). - extensions.py -> extensions/__init__.py (pure rename, 99%); intra-module relative imports bumped from `.x` to `..x` since they reference root siblings. - Root helpers (_require_specify_project, _locate_bundled_extension, load_init_options, _display_project_path) are reached through thin shims that re-fetch from the parent package at call time, so test monkeypatching of specify_cli.<helper> keeps working unchanged. - __init__.py drops ~1444 lines (3511 -> 2067); CLI surface preserved via register(app). No behavior change. Full suite failure set is identical before/after (82 pre-existing env failures, 0 new). * fix(extensions): preserve per-command path in update backup for skills agents Skills agents (extension == "/SKILL.md") name every command file SKILL.md, each in its own per-command subdir (e.g. speckit-plan/SKILL.md). The update backup keyed the backup path on cmd_file.name alone, so all of an agent's skill files collided onto a single backup path — each shutil.copy2 overwrote the previous one, and rollback restored one skill's content over all the others, corrupting or losing the rest. Mirror the real on-disk layout by using cmd_file.relative_to(commands_dir), keeping each backup path unique. This also makes backed_up_command_files values unique so restore copies the correct content back to each command. Add a regression test asserting two distinct skill files survive a backup -> failed-update -> rollback cycle with their own content. * style(extensions): use yaml.safe_dump when writing catalog config The catalog add/remove handlers wrote the integration catalog config with yaml.dump. Switch to yaml.safe_dump to align with the SafeDumper used by the presets commands and to refuse emitting !!python/object tags if a non-basic value ever reaches the config dict. Output is unchanged for the current basic-type payload (str/int/bool/dict/ list) — this is a defensive/consistency change, not a behavioral fix. * fix(extensions): correct _print_cli_warning import path in skill registration register_enabled_extensions_for_agent imported _print_cli_warning from `.` (the extensions package), but the helper lives in the parent specify_cli package. The wrong level raised ImportError inside the error handlers, aborting extension/skill registration on the first failure instead of warning and continuing. Use `..` to match the other parent-package imports. * fix(extensions): escape untrusted values in Rich markup output User-provided arguments and extension/catalog metadata (names, descriptions, versions, IDs, paths) were interpolated into Rich markup strings without escaping. Values containing markup sequences (e.g. [red]...) would be parsed as markup, allowing output injection that could corrupt or mislead CLI messages. Wrap all such interpolations with rich.markup.escape across the extension/catalog command handlers: list, search, info (_print_extension_info), add (including --dev paths), remove, enable, disable, set-priority, update, and the ambiguous-match resolvers (error strings and Table rows). Reuse the already-computed safe_extension where available. Escaping is a no-op for benign strings, so normal output is unchanged. * Prevent Rich markup injection in extension CLI output User-controlled catalog URLs and extension IDs are rendered through Rich-enabled console paths, so every remaining output-only interpolation now escapes markup while leaving stored values and filesystem behavior unchanged. Regression tests cover catalog add, install hints, remove hints, and state command messages with bracketed markup-like values. * Prevent markup injection from exception text Rich markup remains enabled for styled CLI messages, so exception text and config path labels must be escaped before rendering. YAML parser errors, URL validation failures, download errors, and extension validation errors can include user-controlled catalog or manifest values. Constraint: Preserve existing exception handling and user-facing error paths Rejected: Disable Rich markup for these messages | existing output intentionally uses markup for labels and styling Confidence: high Scope-risk: narrow Directive: Escape user-controlled exception text before interpolating into Rich-rendered strings Tested: .venv/bin/python -m pytest tests/test_extensions.py -q Co-authored-by: OmX <omx@oh-my-codex.dev> * Prevent path and manifest review regressions Catalog path labels are rendered through Rich markup and downloaded update manifests are trusted long enough to validate extension IDs. Escape displayed project paths before rendering, and reject non-mapping extension.yml payloads before ID validation so bad archives fail with a clear rollback reason. --------- Co-authored-by: OmX <omx@oh-my-codex.dev> |