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30 Commits

Author SHA1 Message Date
Pascal THUET
490566847c feat(cli): honor SPECIFY_INIT_DIR in the specify CLI project resolver (#3186) 
* feat(cli): honor SPECIFY_INIT_DIR in the specify CLI project resolver

The shell resolver honors SPECIFY_INIT_DIR (#2892), but the Python CLI did
not: it resolved the project as Path.cwd() + a .specify/ check and never read
the override. So setup-plan.sh respected it while `specify integration install`
ignored it, and you still had to cd into the member project.

Route project resolution through a shared _resolve_init_dir_override() that
applies the shell resolver's validation rules (relative to cwd, must exist and
contain .specify/, hard error, no fallback, same error strings). It's wired into
_require_specify_project() — the chokepoint for every project-scoped subcommand
(integration/extension/workflow/preset/...) — and the `workflow run <file>`
standalone path, which re-applies its symlinked-.specify guard on the override
branch too. init is unchanged: it creates .specify/, so the must-pre-exist rule
doesn't apply.

The resolver canonicalizes symlinks via Path.resolve() while the shell keeps the
logical path; they agree for non-symlinked paths (documented in the resolver).

Tests in tests/test_init_dir_cli.py mirror the strict cases from test_init_dir.py
through the CLI; conftest now strips SPECIFY_* for the whole suite so a stray
export can't perturb the now-env-reading resolver. Docs note the CLI applies the
same rules.

Discussion: github/spec-kit#2834

(Disclosure: I used an AI coding agent to audit the call sites and resolver,
draft the change, and run an adversarial code review; reviewed by me.)

* fix(cli): honor SPECIFY_INIT_DIR for bundle commands

Assisted-by: Codex (model: GPT-5, autonomous)

* fix(bundler): refuse symlinked .specify on the SPECIFY_INIT_DIR override path

find_project_root refuses a symlinked .specify (following it could read/write
outside the tree, and a test pins that), but the SPECIFY_INIT_DIR override added
for bundle commands returned early and skipped that guard:
_resolve_init_dir_override validates .specify with is_dir(), which follows
symlinks. So `specify bundle` accepted via the override a layout the cwd path
rejects. Re-check the override result with the same guard, plus a regression test.

(Disclosure: found via an AI code review and fixed with an AI coding agent;
reviewed by me.)

* fix(cli): keep SPECIFY_INIT_DIR strict for bundles

Treat an explicit symlinked SPECIFY_INIT_DIR project as a hard bundle error instead of returning no project, which could initialize the current directory. Align the docs with the actual unset resolver behavior.

Assisted-by: Codex (model: GPT-5, autonomous)

* docs(core): note symlinked .specify handling differs across CLI surfaces

A symlinked .specify is followed by integration/extension/workflow (matching the
shell resolver) but refused by bundle and workflow run <file> (write
confinement). Document the asymmetry so it reads as intentional.

(Disclosure: AI-assisted; reviewed by me.)

* docs(core): reframe symlinked .specify note around the override invariant

Per maintainer feedback on #3186: SPECIFY_INIT_DIR relocates where the project
is, not how a surface treats symlinks. Each surface keeps its cwd-path stance
(write surfaces refuse a symlinked .specify, read/config surfaces follow it),
so the split is one policy relocated, not an inconsistency.

* docs: address Copilot review on resolver docstrings

- _project.py: the error messages "mirror" the shell wording rather than
  "match" it (the CLI renders a Rich `Error:` line, the shell a plain `ERROR:`).
- find_project_root: document that honoring SPECIFY_INIT_DIR when start is None
  can raise typer.Exit / BundlerError, so the Path | None signature isn't
  surprising to direct callers.

* docs(bundler): note require_project_root inherits the override raise behavior

find_project_root can raise typer.Exit / BundlerError under the SPECIFY_INIT_DIR
override (start=None); require_project_root inherits that, so document it
alongside its own BundlerError-on-missing-project.

* docs: clarify symlinked project root behavior

Assisted-by: OpenAI Codex (model: GPT-5, autonomous)

* Address SPECIFY_INIT_DIR review feedback

Assisted-by: OpenAI Codex (model: GPT-5, autonomous)

* Route workflow JSON errors to stderr

Assisted-by: OpenAI Codex (model: GPT-5, autonomous)
 2026-07-01 15:55:18 -05:00
Manfred Riem
53d9543355 feat: make agent-context extension a full opt-in (#3097) 
* docs: add Spec Kit spec for agent-context full opt-in

Use Spec Kit's own specify workflow to author the spec that makes the
agent-context extension a full opt-in, removing all agent-context
configuration/support from the Python codebase and removing the
deprecation message. Force-added despite specs/ being gitignored; the
generated artifact will be purged prior to merge.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* docs: add Spec Kit plan artifacts for agent-context full opt-in

Phase 0/1 of the SDD plan workflow: plan.md, research.md, data-model.md,
quickstart.md, and contracts/cli-behavior.md. Constitution Check is a
documented no-op (repo has no ratified constitution). Force-added despite
specs/ being gitignored; generated artifacts will be purged prior to merge.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* docs: correct Constitution Check against ratified v1.0.0

Earlier draft wrongly treated the gate as a no-op; the fork's main is 16
commits behind upstream/main, which carries .specify/memory/constitution.md.
Re-evaluate the feature against Principles I-V (all PASS) and note that
Principle I mandates keeping context_file as a declared class attribute,
validating the R1 metadata decision.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* docs: refresh plan artifacts against synced upstream/main

After syncing fork main to upstream and rebasing, re-scan the current
agent-context surface. Upstream generalized the single context_file into a
plural context_files concept with new resolver helpers
(_resolve_context_files, _resolve_context_file_values,
_format_context_file_values) and upsert/remove now loop over multiple
files. Update research.md, data-model.md, contracts, quickstart grep
guards, and the plan summary to cover the expanded removal scope.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* docs: add Spec Kit tasks for agent-context full opt-in

Phase 2 of SDD: dependency-ordered tasks.md (30 tasks) organized by the
three user stories, with mandatory test tasks (Constitution Principle II)
and a foundational phase decoupling __CONTEXT_FILE__ resolution from the
extension config. Includes the extension self-seeding task (T015) and a
static guard test (T002) enforcing zero agent-context references in the CLI.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* feat!: remove agent-context lifecycle from the Specify CLI

Make the agent-context extension a full opt-in. The CLI no longer
installs the extension during init, writes agent-context-config.yml,
or creates/updates/removes the managed Spec Kit section in agent
context files. Context-section upsert/remove, marker resolution,
extension-enabled gating, the config helpers, and the obsolete inline
deprecation warning are all removed. Integration context_file stays as
inert metadata; __CONTEXT_FILE__ now resolves from registry metadata.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* feat(agent-context): self-seed context file from the active integration

When agent-context-config.yml has no context_file/context_files, the
bundled bash and PowerShell update scripts now resolve the context file
from the active integration in .specify/init-options.json via the
integration registry, so the extension no longer depends on the CLI
writing its config.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* test+docs: update suite and docs for agent-context opt-in

Update integration/extension tests to expect no agent-context install,
config, or context-section writes during init. Add a static guard test
(test_agent_context_cli_free.py) asserting the CLI source is free of
agent-context lifecycle symbols, plus backward-compatibility tests for
legacy projects. Refresh AGENTS.md, the extension README, and add a
CHANGELOG entry describing the opt-in behavior change.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* fix(agent-context): warn on self-seed failure, correct docs, speed up guard test

Address PR review feedback:
- Self-seed scripts (bash + PowerShell) now emit an actionable warning when
  an active integration is configured but specify_cli cannot be imported by
  the chosen Python (e.g. pipx installs), or when the integration declares no
  context file, instead of silently falling through to 'nothing to do'.
- Correct the extension README disable note: command rendering never reads the
  extension config; __CONTEXT_FILE__ is always substituted from integration
  metadata, so a stale context_files value cannot affect rendering.
- Cache CLI source reads in the static guard test via a module-scoped fixture
  so the directory walk happens once instead of once per forbidden symbol.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* feat(agent-context): ship self-owned per-agent context-file defaults

The extension now bundles agent-context-defaults.json (key→context_file
map) and self-seeds from it, dropping any dependency on the Specify CLI
registry. Both the bash and PowerShell update scripts read the bundled
JSON map keyed by the active integration from init-options.json.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* feat!: remove all agent-context state from the Specify CLI

Strip every context_file reference from the CLI: the field on all 35
integration classes, the IntegrationBase plumbing (process_template
param/step, _context_file_display, docstrings), the __CONTEXT_FILE__
resolution in agents.py, the legacy context_file/context_markers
popping in _helpers.py, and the context_file template in
integration_scaffold.py. Also drop the Agent context update step and
__CONTEXT_FILE__ placeholder from templates/commands/plan.md.

The agent-context extension now solely owns all context-file knowledge,
including the per-agent default mapping.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* test: drop context_file coverage and guard against CLI reintroduction

Remove CONTEXT_FILE attrs and context_file assertions across the base
mixins, all 35 per-integration test files, shared integration tests, and
conftest stubs. Rewrite the base-mixin context tests to assert no managed
section is written and no __CONTEXT_FILE__ placeholder survives. Extend
the CLI-free static guard to forbid context_file, __CONTEXT_FILE__, and
_context_file_display in src/specify_cli, and have the extension tests
copy the bundled defaults JSON so self-seed runs without the CLI.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* docs: reflect full removal of agent-context state from the CLI

Update AGENTS.md (integration examples, required-fields table, context
behavior section, pitfalls), CHANGELOG, and the SDD spec artifacts
(FR-007, SC-002, data-model) to state that the CLI carries no
context_file and the extension fully owns the per-agent default mapping
via agent-context-defaults.json.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* docs: align SDD artifacts with full context_file removal

Update research.md (R1, R2, R4, summary table), contracts/cli-behavior.md
(C3, C5), tasks.md (Phase 2, T026, notes), plan.md (Principle I, source
map), and checklists/requirements.md so the spec artifacts reflect the
implemented decision: the CLI carries no context_file attribute or
__CONTEXT_FILE__ resolution, and the per-agent defaults map lives in the
extension. Resolves PR review #4548130110.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* docs: scrub stale context-file mentions from CLI docstrings

Update the multi_install_safe docstring (drop the removed "context file"
invariant), the RovoDev setup docstring (no longer upserts a context
section), the Copilot module docstring (drop the context-file line), and
tighten the _update_init_options_for_integration note. Pure docstring
changes — no behavioral impact. Resolves PR review #4548237085.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* test+docs: harden agent-context test helper and fix stale docs

- base.py: document multi_install_safe as an optional subclass attribute
  in the IntegrationBase docstring.
- test_cli.py: clarify the init-options assertion is guarding against
  leftover legacy agent-context keys, not relocation.
- test_extension_agent_context.py: _install_agent_context_config now
  asserts the bundled agent-context-defaults.json exists and always
  copies it, so self-seeding tests fail loudly instead of silently
  skipping when the map is missing.
- test_integration_cursor_agent.py: drop Path/IntegrationManifest imports
  left unused after removing the context-section frontmatter tests.

Resolves PR review #4548293116.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* chore: remove gitignored SDD artifacts from specs/

The specs/001-agent-context-full-optin/ artifacts were force-added for
dogfooding visibility, but specs/ is gitignored and these were always
intended to be purged before merge. Remove them so merging does not add
an intentionally-untracked directory to repo history.

Assisted-by: GitHub Copilot (model: Claude Opus 4.8, autonomous)
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* chore: keep CHANGELOG.md identical to upstream

CHANGELOG.md is auto-generated at release time, so the branch should not
carry a manual entry. Restore it to match upstream/main exactly.

Assisted-by: GitHub Copilot (model: Claude Opus 4.8, autonomous)
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* fix: preserve Cursor .mdc frontmatter in agent-context updater scripts

The bundled agent-context updater scripts wrote the managed section as
plain text. For Cursor-style `.mdc` targets this dropped the required
`---\nalwaysApply: true\n---` frontmatter, reintroducing the rule-loading
bug originally fixed in #1699. Port the `_ensure_mdc_frontmatter` logic
into both the bash and PowerShell updaters: prepend frontmatter when
missing, repair `alwaysApply` when set to the wrong value, and leave
non-`.mdc` targets untouched. Add regression tests covering both shells.

Assisted-by: GitHub Copilot (model: Claude Opus 4.8, autonomous)
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* test: scope CLI-free guard to agent-context-specific symbols

Drop the bare "context_file" substring from FORBIDDEN_SYMBOLS so the
guard no longer fails on unrelated future CLI fields named context_file.
The list still covers agent-context-specific identifiers (__CONTEXT_FILE__,
_context_file_display, _resolve_context_files, _resolve_context_file_values).

Assisted-by: GitHub Copilot (model: Claude Opus 4.8, autonomous)
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* fix: harden agent-context bash self-seed against malformed init JSON

Two robustness fixes in the embedded Python self-seed logic:
- Coerce the integration value from init-options.json to a string only when
  it is actually a string; otherwise treat it as unset so a corrupted
  dict/list value degrades to the existing nothing-to-do behavior instead of
  breaking the agents-map lookup.
- Normalize agent-context-defaults.json: only use 'agents' when both the JSON
  root and the 'agents' value are dicts, so a wrong-shaped (but valid) JSON
  falls back to the warning path instead of raising on .get.

Assisted-by: GitHub Copilot (model: Claude Opus 4.8, autonomous)
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* fix: correct PowerShell hyphenated key lookup and regex replace count

- Self-seed now reads the defaults mapping via
  $defaults.agents.PSObject.Properties[$integrationKey].Value instead of
  member access ($defaults.agents.$integrationKey), which parsed hyphenated
  keys like 'cursor-agent'/'kiro-cli' as subtraction and failed to resolve.
- Replace the static [regex]::Replace(..., 1) call, whose trailing 1 was
  interpreted as RegexOptions.IgnoreCase rather than a replacement count, with
  an instance Regex whose Replace(input, replacement, 1) limits to the first
  match as intended.

Assisted-by: GitHub Copilot (model: Claude Opus 4.8, autonomous)
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* fix: make bash .mdc frontmatter guard case-insensitive

The bash updater only injected Cursor .mdc frontmatter when ctx_path ended
in lowercase '.mdc', so a mixed/upper-case extension (e.g. specify-rules.MDC)
was skipped and Cursor would not auto-load the rule file. Compare against the
casefolded path. The PowerShell variant already uses -match, which is
case-insensitive by default, so no change is needed there.

Assisted-by: GitHub Copilot (model: Claude Opus 4.8, autonomous)
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* docs: document separator-agnostic agent-context update invocation

The README hard-coded the dot-notation slash command
(/speckit.agent-context.update), which hyphen-separator agents like Forge and
Cline do not recognize. Document the canonical command ID plus both slash
invocations so users copy the form their agent accepts.

Assisted-by: GitHub Copilot (model: Claude Opus 4.8, autonomous)
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

---------

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
 2026-06-29 15:27:26 -05:00
José Villaseñor Montfort
e5a03bffc8 fix(shared-infra): remove stale managed scripts the core no longer ships (#3076) (#3098) 
* fix(shared-infra): remove stale managed scripts the core no longer ships (#3076)

install_shared_infra never removed shared scripts a prior (pre-refactor) install recorded but the current core no longer ships — e.g. the legacy scripts/<variant>/update-agent-context.sh, superseded by the bundled agent-context extension. On a legacy project the orphan lingers and crashes when it sources a refreshed common.sh (HAS_GIT unbound under set -u).

Apply the stale-removal that integration_upgrade already performs to install_shared_infra: manifest-tracked scripts the current bundle no longer produces are removed, but only managed copies (hash matches the manifest); user-customized files, symlinks, and recovered entries are preserved. Guarded so a missing/empty source can't trigger mass deletion, and the safe-destination check prevents unlinking through a symlinked ancestor.

Add IntegrationManifest.remove(); drop the stale update-agent-context.sh reference in CONTRIBUTING.md.

AI assistance: implemented with Claude Code (Anthropic); reviewed and validated locally (ruff clean, full suite 4176 passed, manual CLI repro).

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(shared-infra): harden stale-cleanup per review (empty source + orphan manifest)

- Set scripts_scanned only after a real source file is seen, so an empty variant source can't trigger mass deletion of tracked scripts.
- Prune a stale manifest entry even when its file is already gone from disk, keeping the manifest consistent (previously left tracked forever).
- Add a test for each edge case.

Addresses the Copilot review comments on #3098. AI assistance: Claude Code (Anthropic), reviewed/validated locally (ruff clean, full suite 4178 passed).

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(shared-infra): guard unsafe manifest keys in stale-cleanup (review)

- Skip absolute / '..' manifest keys before any filesystem access in stale-cleanup, so a corrupted/hand-edited manifest can't make it touch paths outside the project root (mirrors IntegrationManifest.check_modified / uninstall).
- Clarify the scripts_scanned comment: the safety hinge is that flag, not seen_rels (which also holds template paths).
- Add a containment test: a traversal manifest key is skipped, its target untouched.

Addresses the second round of Copilot review on #3098. AI assistance: Claude Code (Anthropic); validated locally (ruff clean, full suite 4179 passed).

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(manifest): make remove() reject absolute/.. keys like its siblings (review)

IntegrationManifest.remove() now applies the same lexical validation and normalization as record_existing() / is_recovered(): absolute paths and '..' segments are rejected (return False) instead of being used verbatim as a key. Keeps the manifest API consistent. Adds tests (valid drop + no-op, absolute rejected, traversal rejected).

Addresses the third round of Copilot review on #3098. AI assistance: Claude Code (Anthropic); validated locally (ruff clean, full suite 4182 passed).

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(shared-infra): validate stale-cleanup keys for containment, not just lexically (review)

The stale-script cleanup guarded manifest keys with a lexical check only
(is_absolute() / ".." segments). On Windows a drive-relative key such as
"C:tmp\\file" is not is_absolute(), yet joining it onto the project path
discards the root — so cleanup could stat/unlink outside the project before
_ensure_safe_shared_destination raised, and a corrupted manifest key turned
into an install-time hard failure (ValueError) instead of being skipped.

Reuse the canonical containment helper (_validate_rel_path, the same one
IntegrationManifest.is_recovered / remove use): after the fast lexical reject,
resolve the join and confirm it stays within the project root; a key that
still escapes is skipped, never unlinked, never fatal.

Adds a regression test that forces _validate_rel_path to reject a managed key
(portably simulating the Windows drive-relative escape) and asserts the
install skips it without failing and still installs the real scripts.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
 2026-06-23 07:36:54 -05:00
darion-yaphet
826e193cee refactor: move extension command handlers to extensions/_commands.py (PR-7/8) (#3014) 
* refactor: move extension command handlers to extensions/_commands.py (PR-7/8)

Convert the flat extensions.py module into an extensions/ package and
extract all extension_app and catalog_app command handlers plus their
private helpers (_resolve_installed_extension, _resolve_catalog_extension,
_print_extension_info) out of __init__.py into the new
extensions/_commands.py, mirroring the domain-dir layout used for
presets/_commands.py (PR-6) and integrations/_commands.py (PR-5).

- extensions.py -> extensions/__init__.py (pure rename, 99%); intra-module
  relative imports bumped from `.x` to `..x` since they reference root
  siblings.
- Root helpers (_require_specify_project, _locate_bundled_extension,
  load_init_options, _display_project_path) are reached through thin shims
  that re-fetch from the parent package at call time, so test
  monkeypatching of specify_cli.<helper> keeps working unchanged.
- __init__.py drops ~1444 lines (3511 -> 2067); CLI surface preserved via
  register(app).

No behavior change. Full suite failure set is identical before/after
(82 pre-existing env failures, 0 new).

* fix(extensions): preserve per-command path in update backup for skills agents

Skills agents (extension == "/SKILL.md") name every command file SKILL.md,
each in its own per-command subdir (e.g. speckit-plan/SKILL.md). The update
backup keyed the backup path on cmd_file.name alone, so all of an agent's
skill files collided onto a single backup path — each shutil.copy2 overwrote
the previous one, and rollback restored one skill's content over all the
others, corrupting or losing the rest.

Mirror the real on-disk layout by using cmd_file.relative_to(commands_dir),
keeping each backup path unique. This also makes backed_up_command_files
values unique so restore copies the correct content back to each command.

Add a regression test asserting two distinct skill files survive a
backup -> failed-update -> rollback cycle with their own content.

* style(extensions): use yaml.safe_dump when writing catalog config

The catalog add/remove handlers wrote the integration catalog config with
yaml.dump. Switch to yaml.safe_dump to align with the SafeDumper used by the
presets commands and to refuse emitting !!python/object tags if a non-basic
value ever reaches the config dict.

Output is unchanged for the current basic-type payload (str/int/bool/dict/
list) — this is a defensive/consistency change, not a behavioral fix.

* fix(extensions): correct _print_cli_warning import path in skill registration

register_enabled_extensions_for_agent imported _print_cli_warning from `.` (the extensions package), but the helper lives in the parent specify_cli package. The wrong level raised ImportError inside the error handlers, aborting extension/skill registration on the first failure instead of warning and continuing. Use `..` to match the other parent-package imports.

* fix(extensions): escape untrusted values in Rich markup output

User-provided arguments and extension/catalog metadata (names, descriptions, versions, IDs, paths) were interpolated into Rich markup strings without escaping. Values containing markup sequences (e.g. [red]...) would be parsed as markup, allowing output injection that could corrupt or mislead CLI messages.

Wrap all such interpolations with rich.markup.escape across the extension/catalog command handlers: list, search, info (_print_extension_info), add (including --dev paths), remove, enable, disable, set-priority, update, and the ambiguous-match resolvers (error strings and Table rows). Reuse the already-computed safe_extension where available.

Escaping is a no-op for benign strings, so normal output is unchanged.

* Prevent Rich markup injection in extension CLI output

User-controlled catalog URLs and extension IDs are rendered through Rich-enabled console paths, so every remaining output-only interpolation now escapes markup while leaving stored values and filesystem behavior unchanged. Regression tests cover catalog add, install hints, remove hints, and state command messages with bracketed markup-like values.

* Prevent markup injection from exception text

Rich markup remains enabled for styled CLI messages, so exception text and config path labels must be escaped before rendering. YAML parser errors, URL validation failures, download errors, and extension validation errors can include user-controlled catalog or manifest values.

Constraint: Preserve existing exception handling and user-facing error paths

Rejected: Disable Rich markup for these messages | existing output intentionally uses markup for labels and styling

Confidence: high

Scope-risk: narrow

Directive: Escape user-controlled exception text before interpolating into Rich-rendered strings

Tested: .venv/bin/python -m pytest tests/test_extensions.py -q

Co-authored-by: OmX <omx@oh-my-codex.dev>

* Prevent path and manifest review regressions

Catalog path labels are rendered through Rich markup and downloaded update manifests are trusted long enough to validate extension IDs. Escape displayed project paths before rendering, and reject non-mapping extension.yml payloads before ID validation so bad archives fail with a clear rollback reason.

---------

Co-authored-by: OmX <omx@oh-my-codex.dev>
 2026-06-22 13:40:57 -05:00
Copilot
927f54feea feat: make git extension opt-in and remove --no-git at v0.10.0 (#2873) 
* feat(init)!: make git extension opt-in and remove --no-git at v0.10.0

- Remove --no-git parameter from specify init command
- Remove git extension auto-installation from init flow
- Git repository initialization (git init) still runs when git is available
- Remove --no-git from all test invocations across the test suite
- Update docs to reflect opt-in git extension behavior
- Replace TestGitExtensionAutoInstall with TestGitExtensionOptIn tests

BREAKING CHANGE: specify init no longer auto-installs the git extension.
Use `specify extension add git` to install it explicitly.
The --no-git flag has been removed.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* refactor(scripts): remove git operations from core scripts

Git functionality is now entirely managed by the git extension.
Core scripts only handle directory-based feature creation and numbering.

- Remove has_git(), check_feature_branch(), git branch creation from core
- Simplify number detection to use only spec directory scanning
- Remove HAS_GIT output from get_feature_paths()
- Remove git remote fetching and branch querying
- Keep BRANCH_NAME output key for backward compatibility

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* refactor: remove all git operations from core

- Remove is_git_repo() and init_git_repo() dead code from _utils.py
- Remove --branch-numbering from init command
- Remove git from 'specify check' (now extension-only)
- Update docs: git is optional prerequisite, check command description
- Fix tests to reflect no-git-in-core reality (fallback to main)

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* refactor(scripts): remove directory scanning and branch fallback from core

Core scripts now resolve feature context exclusively from:
1. SPECIFY_FEATURE env var (set by git extension)
2. .specify/feature.json (persisted by specify command)

Removed find_feature_dir_by_prefix() and directory scanning heuristics —
these are the git extension's responsibility. Scripts error clearly when
no feature context is available.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* feat: introduce feature_numbering, deprecate branch_numbering in init-options

- specify command template now reads feature_numbering (preferred) with
  fallback to branch_numbering (deprecated) from init-options.json
- Git extension reads git-config.yml > feature_numbering > branch_numbering
- init now writes feature_numbering: sequential to init-options.json
- Deprecation warning emitted when branch_numbering is used as fallback

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* fix: remove trailing whitespace in common.ps1

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* feat(scripts): persist SPECIFY_FEATURE_DIRECTORY env var to feature.json

When SPECIFY_FEATURE_DIRECTORY is set, get_feature_paths() now writes the
value to .specify/feature.json so future sessions without the env var can
still resolve the feature directory. The write is idempotent — it skips
when the file already contains the same value.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* fix: address review feedback — error messages and docs

- Update error messages in common.sh and common.ps1 to reference
  SPECIFY_FEATURE_DIRECTORY instead of SPECIFY_FEATURE (which no longer
  resolves feature directories)
- Fix get_current_branch comment (returns empty string, not error)
- Update upgrade.md to reference SPECIFY_FEATURE_DIRECTORY with correct
  example paths
- Update local-development.md troubleshooting: replace stale 'Git step
  skipped' row with actionable git extension guidance

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* fix(scripts): harden feature.json persistence

- Use json_escape in printf fallback when jq is unavailable (common.sh)
- Replace utf8NoBOM encoding with UTF8Encoding($false) for PowerShell
  5.1 compatibility (common.ps1)

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* refactor(scripts): remove dead feature_json_matches_feature_dir functions

These guards are no longer needed since the branch-name validation they
protected against has been removed from check-prerequisites.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* refactor(git-ext): rename create-new-feature to create-new-feature-branch

The git extension's script only creates the git branch — rename it to
reflect that responsibility. The core create-new-feature.sh/.ps1 handles
feature directory creation and feature.json persistence.

Also includes fixes from review feedback:
- common.sh: _persist_feature_json uses json_escape fallback
- common.ps1: Save-FeatureJson uses UTF8Encoding for PS 5.1 compat
- common.ps1: case-sensitive path stripping on non-Windows
- create-new-feature.sh/ps1: output both SPECIFY_FEATURE and
  SPECIFY_FEATURE_DIRECTORY
- setup-tasks.sh: fix stale 'Validate branch' comment

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* fix(tests): update references to renamed git extension scripts

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* fix(tests): remove duplicate EXT_CREATE_FEATURE assignments

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

---------

Co-authored-by: Manfred Riem <mnriem@users.noreply.github.com>
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
 2026-06-09 06:13:07 -05:00
Copilot
7106858c4e feat!: remove legacy --ai, --ai-commands-dir, and --ai-skills flags (0.10.0) (#2872) 
* Initial plan

* feat!: remove legacy --ai, --ai-commands-dir, and --ai-skills flags at 0.10.0

* refactor(tests): rename stale test_ai_help_* methods to test_agent_config_*

* fix: address review — derive agent folder for generic integration and remove redundant test

- Security notice now falls back to integration_parsed_options['commands_dir']
  when AGENT_CONFIG folder is None (generic integration).
- Remove test_agent_config_includes_kiro_cli which duplicates the assertion
  in test_runtime_config_uses_kiro_cli_and_removes_q.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* docs: scrub all remaining --ai flag references from source and tests

- Remove dead AI_ASSISTANT_ALIASES, AI_ASSISTANT_HELP, and
  _build_ai_assistant_help() from _agent_config.py
- Update comments/docstrings in extensions.py, presets.py, and
  integration subpackages to reference 'skills mode' or
  '--integration' instead of the removed flags
- Fix catalog.json generic integration description
- Update test docstrings/comments in test_extension_skills.py,
  test_extensions.py, and test_presets.py

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* test: remove legacy --ai flag rejection tests

The flags are fully removed from the CLI; typer handles unknown options
generically. No custom rejection logic exists to test.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* revert: remove manual CHANGELOG.md entry

CHANGELOG is generated automatically; manual edits should not be made.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* fix: make generic catalog description self-explanatory

Include the required --commands-dir sub-option in the description so
readers don't need to look up integration docs.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* fix(tests): rename duplicate test classes to avoid shadowing

The rename from Test*AutoPromote to Test*Integration collided with the
existing Test*Integration(SkillsIntegrationTests) base classes, causing
the shared test suites to be silently overwritten. Rename the CLI init
flow classes to Test*InitFlow instead.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

---------

Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com>
Co-authored-by: Manfred Riem <mnriem@users.noreply.github.com>
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
 2026-06-05 14:56:28 -05:00
Pedro Barbosa
44aac9f6e4 feat: add native Cline integration (#2508) 
* test: strip ansi to make asserts work

* feat: add native Cline integration
 2026-06-01 11:20:48 -05:00
Copilot
50da3a0f77 Extract agent context updates into bundled agent-context extension (#2546) 
* Initial plan

* Extract agent context updates into bundled agent-context extension

* Potential fix for pull request finding 'Unused import'

Co-authored-by: Copilot Autofix powered by AI <223894421+github-code-quality[bot]@users.noreply.github.com>

* Potential fix for pull request finding 'Unused import'

Co-authored-by: Copilot Autofix powered by AI <223894421+github-code-quality[bot]@users.noreply.github.com>

* fix: address review comments on agent-context extension

- bash: parse init-options.json with a single python3 invocation instead
  of three separate read_json_field calls, for parity with the PowerShell
  ConvertFrom-Json approach and to avoid divergent error semantics
- bash: use parameter expansion to strip PROJECT_ROOT prefix from plan
  path instead of sed interpolation, avoiding special-character fragility
- powershell: limit Get-ChildItem to -Depth 1 so plan.md discovery matches
  the bash glob specs/*/plan.md (one level deep) — fixes cross-platform
  inconsistency with nested plan.md files
- powershell: replace Substring+Length relative-path with
  [System.IO.Path]::GetRelativePath for robustness across case/PSDrive
  differences
- __init__.py: move agent-context extension install to after
  save_init_options so init-options.json is present when hooks run
- __init__.py: seed context_markers in init-options only when
  context_file is truthy; avoids noise for integrations without a context
  file
- integrations/base.py: narrow blanket except Exception in
  _resolve_context_markers to ImportError / (OSError, ValueError) so
  unexpected bugs surface instead of being silently swallowed

* fix: gate context_markers in _update_init_options_for_integration on context_file

Apply the same gating logic used during `specify init`: only write
context_markers to init-options.json when the integration actually has a
context_file set.  When switching to an integration without a context file
the stale markers are removed, keeping the two init paths consistent.

* fix: move context_file/context_markers from init-options.json to agent-context extension config

* Potential fix for pull request finding 'Unused global variable'

Co-authored-by: Copilot Autofix powered by AI <223894421+github-code-quality[bot]@users.noreply.github.com>

* fix: clarify local import comment in agents.py

* Fix remaining agent-context review findings

* Fix follow-up agent-context review issues

* Address review feedback: narrow except, improve PyYAML messaging, surface config-written note

* Fix double-space in PyYAML install hint message

* Potential fix for pull request finding 'Empty except'

Co-authored-by: Copilot Autofix powered by AI <223894421+github-code-quality[bot]@users.noreply.github.com>

* Potential fix for pull request finding 'Empty except'

Co-authored-by: Copilot Autofix powered by AI <223894421+github-code-quality[bot]@users.noreply.github.com>

* Address latest agent-context review feedback

* Harden bash config parse output handling

* Clarify ImportError-only fallback comment

* Apply review feedback: drop dead try/except, guard ext-config creation, explicit ConvertFrom-Yaml check

* Remove redundant $Options = $null in PS1 catch block

* Add constitution directives, deprecation warning, agent-context auto-install, and init flow fix

- Add constitution-loading directive to specify, clarify, tasks, checklist, taskstoissues commands
- Add deprecation warning (v0.12.0) in upsert_context_section()
- Auto-install agent-context extension during specify init
- Move context_file from init-options.json to agent-context extension config
- Add tests: deprecation warning, corrupt config, constitution directives
- Update file inventories across all integration tests

* Address review: fix init ordering, test coverage, and hermes inventory

- Move agent-context extension install after init-options.json is saved
  so skill registration can read ai_skills + integration key
- Write extension config after install (avoids template overwriting context_file)
- Fix test_defaults_when_markers_field_missing to truly test missing markers key
- Update hermes tests to allow extension-installed agent-context skill

* Address review: chmod ordering, preserve markers, PS1 Python check, YAML key order

- Move ensure_executable_scripts after agent-context extension install
  so extension scripts get execute bits set
- Use preserve_markers=True on reinit to keep user-customized markers
- Add Python 3 version check in PowerShell fallback (matching bash behavior)
- Add sort_keys=False to yaml.safe_dump for stable config output

* Address review: path traversal guards and docstring fix

- Reject absolute paths and '..' segments in context_file in both bash and
  PowerShell scripts to prevent writes outside the project root
- Fix docstring in _update_init_options_for_integration to accurately
  describe marker preservation behavior

* Address review: strict enabled check, docstring, segment-level path traversal

- Use 'is not False' for enabled check so only literal False disables
- Update upsert_context_section docstring to mention disabled-extension return
- Fix path traversal guards to check actual path segments, not substrings
  (allows filenames like 'notes..md' while rejecting '../' traversal)

* Address review: UnicodeError handling, missing extension warning

- Add UnicodeError to exception tuples in _load_agent_context_config and
  _resolve_context_markers so garbled UTF-8 config files fall back to defaults
- Emit error (with reinstall command) instead of silent skip when bundled
  agent-context extension is not found during init

* Address review: bash backslash traversal guard, wheel packaging

- Reject backslash separators and Windows drive-letter paths in bash
  context_file validation (prevents traversal on Git-Bash/Windows)
- Add extensions/agent-context to pyproject.toml force-include so the
  bundled extension is included in wheel builds

* Address review: write extension config before init-options.json

- Reorder writes in _update_init_options_for_integration so the
  agent-context extension config is updated first; if it fails,
  init-options.json remains consistent with the previous state

---------

Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com>
Co-authored-by: Manfred Riem <15701806+mnriem@users.noreply.github.com>
Co-authored-by: Copilot Autofix powered by AI <223894421+github-code-quality[bot]@users.noreply.github.com>
 2026-05-30 06:37:18 -05:00
WOLIKIMCHENG
57a518a583 Fix shared script command hints for integration separators (#2627) 
* fix shared script command refs for integration separators

* Fix integration use shared infra refresh hint

* Clarify shared infrastructure force wording

---------

Co-authored-by: root <1647273252@qq.com>
Co-authored-by: root <kinsonnee@gmail.com>
 2026-05-28 10:02:27 -05:00
Copilot
c7e0cacaff fix: PS 5.1 compat — replace non-ASCII chars in shipped PowerShell scripts (#2709) 
* Initial plan

* fix: replace non-ASCII chars in PS1 files, add encoding regression tests, fix ANSI stripping in tests, update docs

---------

Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com>
 2026-05-26 13:18:34 -05:00
darion-yaphet
3d50f85875 fix(cli): clarify exception diagnostics (#2602) 
Consolidate the CLI diagnostic plan, implementation, and test hardening into one reviewable change. The CLI now reports phase and target context for broad failure paths while preserving existing fail-fast behavior for real setup failures and warning-only behavior for optional best-effort work.

The workflow unit tests also avoid discovering real local agent CLIs, so developer machines with tools such as gemini installed do not hang pytest during metadata-only assertions.

Constraint: CLI setup failures must remain fail-fast, while optional preset and cleanup paths should continue with clear warnings.

Rejected: Replace broad handlers across the whole codebase in one pass | too broad for a targeted CLI diagnostic fix

Rejected: Add runtime timeouts to workflow agent dispatch | dispatch may legitimately be long-running and the observed hang was test isolation

Confidence: high

Scope-risk: moderate

Directive: Keep future best-effort CLI warnings tied to the failed phase and target so users can diagnose setup state.

Tested: uvx ruff check src/; uv run pytest tests/integrations/test_cli.py -v; uv run pytest tests/test_workflows.py::TestCommandStep::test_step_override_integration tests/test_workflows.py::TestPromptStep::test_execute_with_step_integration tests/test_workflows.py::TestPromptStep::test_execute_with_model -vv; uv run pytest

Not-tested: Real Nacos/PG/Redis-style external service failure injection; real interactive workflow dispatch against installed gemini CLI
 2026-05-20 21:19:48 -05:00
Quratulain-bilal
409ec59704 fix(workflow): support integration: auto to follow project's initialized AI (#2421) 
* fix(workflow): support integration: auto to follow project's initialized AI

Closes #2406

(squashed)

* fix(workflow): combine JSONDecodeError and UnicodeDecodeError handling

Address Copilot feedback: UnicodeDecodeError can be raised by both
read_text() and json.loads(), so combining the handlers ensures both
cases produce a consistent, clear error message.

* fix(workflows): honor integration_state schema guard and modern state in 'integration: auto'

Three Copilot follow-ups on PR #2421:

1. engine.py:799 — `_load_project_integration` was bypassing the same
   schema guard `_read_integration_json` enforces. It now reads the
   schema field directly, returns None on a future schema (so the
   workflow falls back to the literal 'auto' default rather than
   guessing), and routes through `normalize_integration_state` /
   `default_integration_key` so modern installs that record
   `default_integration` / `installed_integrations` (without the
   legacy top-level `integration` field) resolve correctly.

2. test_workflows.py — added two regression cases:
   - `integration: auto` resolves a modern normalized state file
   - `integration: auto` falls back when the state file declares a
     newer `integration_state_schema` than this CLI supports

3. test_cli.py — added a CLI-level regression for the `UnicodeDecodeError`
   branch in `_read_integration_json` to match the existing
   malformed-JSON coverage.

* refactor(integration): extract shared try_read_integration_json helper

Address Copilot review on PR #2421:

Both `_read_integration_json` (CLI) and `_load_project_integration`
(workflow engine) were parsing `.specify/integration.json` independently,
duplicating the schema guard and risking drift between the two readers.

Extract the parse + schema validation into a single low-level helper
`try_read_integration_json` in `integration_state.py` that returns either
the normalized state or a structured `IntegrationReadError`. Both callers
now delegate to this helper:

- CLI keeps its loud-fail UX: each error kind ("decode", "os",
  "not_object", "schema_too_new") is translated into the existing console
  message + typer.Exit(1).
- Engine keeps its silent fallback: any error simply returns None so
  `integration: auto` falls back to the workflow's literal default.

This eliminates the divergence Copilot flagged without changing observable
behavior for either caller.

* fix(integration): distinguish missing file from non-regular path

Address Copilot review on PR #2421:

`try_read_integration_json` was collapsing two distinct cases into a
single `(None, None)` return:

1. `.specify/integration.json` truly missing — silent fallback is correct.
2. Path exists but is a directory, socket, or other non-regular file —
   this is a misconfiguration the CLI should surface loudly.

Split the check: `exists()` falsey returns `(None, None)`; existing-but-
not-a-regular-file returns `(None, IntegrationReadError(kind="os", ...))`
so the CLI's loud-fail path produces an actionable error while the
engine still treats it as a fallback to the workflow's literal default.

* docs(workflow): clarify version pin, advisory integrations list, enum exemption

- workflow.yml: fix comment that said 0.8.3 was first release with auto
  resolution; the pin is >=0.8.5 so the comment now matches the pin.
- workflow.yml: clarify that requires.integrations.any is an advisory,
  non-exhaustive compatibility hint, not a closed set.
- engine.py: clarify that the auto-sentinel exemption only skips enum
  membership; declared type is still enforced through _coerce_input.

* fix(workflow): resolve auto sentinel for provided values; report stat errors

Two Copilot findings fixed:

1. _resolve_inputs only resolved the ``integration: auto`` sentinel when it
   came from the input default. A caller explicitly providing
   ``{"integration": "auto"}`` (which the workflow prompt advertises as a
   valid value) bypassed _resolve_default and the literal "auto" leaked
   to dispatch. Provided values now go through the same resolution path
   as defaults, and the enum-membership exemption applies in both cases.
   Regression test added.

2. try_read_integration_json used Path.exists() / Path.is_file() as a
   pre-check. Both return False on some OSErrors (e.g. permission errors
   during stat), which silently treated an unreadable-but-present file
   as missing — the engine fell back without warning and the CLI failed
   to surface the loud error. The pre-check is gone: read_text() is
   attempted directly, FileNotFoundError means missing (silent fallback),
   IsADirectoryError and other OSErrors become loud IntegrationReadError.

* fix(workflow): enforce declared type for string inputs, reject bool-as-number

Two Copilot findings fixed:

1. _coerce_input previously coerced/validated only ``number`` and
   ``boolean`` types, so ``type: string`` silently accepted any Python
   value (numbers, lists, dicts). A YAML authoring mistake like
   ``type: string`` + ``default: 5`` slipped through. Strings are now
   required to actually be strings; non-strings raise ValueError, which
   surfaces as an ``invalid default`` error from validate_workflow.

2. ``type: number`` accepted ``default: true`` because ``bool`` is a
   subclass of ``int`` (``float(True) == 1.0``). Bools are now rejected
   explicitly in the number path so the YAML mistake fails fast. The
   boolean path is also tightened to reject non-bool / non-string
   values for symmetry.

Comment on the auto-sentinel enum exemption updated to reflect the
stronger guarantee. Regression tests added for both rejections.

* fix(cli): drop unused normalize_integration_state import to satisfy ruff

CI's `uvx ruff check src/` flagged this as F401: the symbol was imported
under a private alias but never referenced. Tests stay green after
removal.
 2026-05-15 16:03:33 -05:00
Quratulain-bilal
947b4398c7 fix(integration): refresh shared infra on integration switch (#2375) 
* fix(integration): refresh shared infra on integration switch

* fix(integration): address Copilot review on switch shared-infra refresh

- Clarify install_shared_infra docstring: force overwrites regular files
  but always preserves symlinks (safe-destination check refuses to follow).
- Print refresh_hint only for preserved_user_files; skipped_files keeps
  the generic remediation. Avoids misleading guidance when files were
  merely skipped (not detected as customized).
- Catch ValueError from the safe-destination check and bucket the path
  under a new symlinked_files warning instead of aborting the switch.
- Restore templates/constitution-template.md to upstream (drop accidental
  leading blank lines).

* fix(integration): narrow symlink bucketing to dedicated exception

Address Copilot feedback on shared_infra.py:305 — _safe_dest_or_bucket
caught any ValueError as 'symlinked', which masked genuine safety errors
(path escape, parent-not-a-directory).

- Introduce SymlinkedSharedPathError(ValueError) raised only by the
  symlink-specific branches in _ensure_safe_shared_*().
- _safe_dest_or_bucket() now catches only SymlinkedSharedPathError;
  other ValueErrors propagate so the operation aborts with the real
  cause instead of being silently bucketed.
- Wrap top-level dest_scripts/dest_variant/dest_templates mkdir calls
  in the same bucket helper so a symlinked .specify/scripts or
  .specify/templates is preserved with a warning rather than aborting
  the switch (matches the documented 'preserve customizations' behavior).
- Update tests to expect the new bucket+warn behavior for leaf-level
  symlinked destinations.

* fix(integration): tailor shared-infra warnings and rename preflight test

Address Copilot review on PR #2375:

- skipped_files hint now uses refresh_hint when refresh_managed=True
  so integration switch suggests --refresh-shared-infra instead of the
  generic init/upgrade flags.
- symlinked-files warning header says "path(s)" rather than "file(s)"
  since symlinked directories (e.g. .specify/scripts/bash) are also
  bucketed there.
- Rename test_shared_infra_install_preflights_before_writing to
  test_shared_infra_install_buckets_unsafe_destinations_and_continues
  to match the new bucket-and-continue semantics.

* test: rename symlink bucketing tests to reflect bucket-and-continue behavior

The two file-bucketing tests at line 300/320 were named *_refuses_*, but
the new behavior buckets symlinked file destinations with a warning while
safe destinations in the same install still complete. Rename to
*_buckets_* and update docstrings to match.

The remaining *_refuses_* tests (line 342/362/381) genuinely raise on
symlinked dirs/manifests and keep their names.

---------

Co-authored-by: Quratulain-bilal <quratulain.bilal@users.noreply.github.com>
 2026-05-11 10:49:48 -05:00
Andrii Furmanets
2d5e63005d fix: default non-interactive init to copilot integration (#2414) 
* fix: default non-interactive init integration

* chore: clarify non-interactive init default integration

* Address non-interactive init review feedback

* Fix interactive init test after fallback
 2026-05-06 12:48:50 -05:00
Pascal THUET
a7201c183e fix(workflows): require project for catalog list (#2436) 2026-05-04 12:00:28 -05:00
Manfred Riem
822a0e5c61 feat: emit init-time notice for git extension default change (#2165) (#2432) 
Add a non-blocking Panel notice during `specify init` when the git
extension auto-enables, informing users that starting in v0.10.0 this
will require explicit opt-in via `specify extension add git`.

- src/specify_cli/__init__.py: track successful git extension install
  and display yellow "Notice: Git Default Changing" panel
- tests/integrations/test_cli.py: integration test validating notice
  content (v0.10.0 timeline, opt-in messaging, migration command)
- docs/reference/core.md: user-facing NOTE about the upcoming change

Closes #2165
 2026-05-01 13:06:42 -05:00
Pascal THUET
38fd1f6cc2 Support controlled multi-install for safe AI agent integrations (#2389) 
* support controlled multi-install integrations

* fix: harden multi-install integration state

* refactor: isolate integration runtime helpers

* fix: address copilot review feedback

* fix: address follow-up copilot feedback

* fix: tighten integration switch semantics

* fix: address final copilot review feedback

* fix: harden integration manifest read errors

* fix: refuse symlinked shared infra paths

* test: filter expected self-test preset warning

* test: address copilot review nits

* refactor: centralize safe shared infra writes

* fix: use no-follow writes for shared infra

* fix: keep default integration atomic on template refresh

* fix: harden shared infra error paths

* fix: preflight shared infra and future state schemas

* fix: support nested shared scripts during preflight

* test: tolerate wrapped schema error output

* fix: use safe default mode for shared text writes

* fix: use posix paths in shared skip output

* fix: share project guard for integration use

* fix: centralize spec-kit project guards

* fix: use posix project paths in cli output

* fix: harden shared manifest and upgrade refresh
 2026-05-01 11:54:41 -05:00
Pascal THUET
63cad6ace6 chore(integrations): clean up docs and project guard (#2428) 2026-05-01 10:33:22 -05:00
Adrian Osorio Blanchard
1049e17a43 feat: add catalog discovery CLI commands (#2360) 
* feat: add catalog discovery CLI commands

* fix: address second Copilot review

* fix: address third Copilot review

* fix: align catalog remove with displayed order

* fix: route local catalog config errors to local guidance

* fix: address integration catalog review feedback

* fix: accept numeric string catalog priorities

* fix: align catalog remove with visible entries

* fix: preserve invalid catalog root validation

* fix: include invalid catalog priority value

* fix: preserve falsy catalog root validation

* fix: clarify integration catalog guidance

* fix: align integration catalog list and remove

* fix: align integration catalog edge cases

* fix: clarify catalog error guidance tests

* fix: clarify integration catalog edge cases

* fix: harden integration catalog removal

* fix: validate integration state before catalog search

* fix: reject empty integration catalog URL

* fix: allow catalog remove to clean non-string URLs

* fix: address catalog env and priority review

* fix: align catalog source display names

* fix: align catalog fallback names
 2026-04-29 07:24:30 -05:00
Manfred Riem
03f3024c66 feat(init): deprecate --no-git flag, gate deprecations at v0.10.0 (#2357) 
* feat(init): deprecate --no-git flag, gate deprecations at v0.10.0

- Add deprecation warning when --no-git is used on specify init
- Update --ai deprecation gate from 1.0.0 to 0.10.0
- Update test expectation for the new version gate

Closes #2167

* fix: address PR review feedback

- Update --no-git deprecation message to reference existing 'specify extension'
  commands instead of non-existent --extension flag
- Add test_no_git_emits_deprecation_warning CLI test

* fix: strengthen --no-git deprecation test assertions

Add assertions unique to the --no-git message ('will be removed',
'git extension will no longer be enabled by default') to prevent
false positives from the --ai deprecation panel.
 2026-04-24 13:54:40 -05:00
Manfred Riem
52c0a5f88f fix: resolve command references per integration type (dot vs hyphen) (#2354) 
* fix: resolve command references per integration type (dot vs hyphen)

Replace hardcoded /speckit.<cmd> references in templates with
__SPECKIT_COMMAND_<NAME>__ placeholders that are resolved at
setup time based on the integration type:

- Markdown/TOML/YAML agents: separator='.' → /speckit.plan
- Skills agents: separator='-' → /speckit-plan

Changes:
- Add resolve_command_refs() static method to IntegrationBase
- Add invoke_separator class attribute (.  for base, - for skills)
- Wire into process_template() as step 8
- Update _install_shared_infra() to process page templates
- Replace /speckit.* in 5 command templates and 3 page templates
- Add unit tests for resolve_command_refs (positive + negative)
- Add integration tests verifying on-disk content for all agents
- Add end-to-end CLI tests for Claude (skills) and Copilot (markdown)

Fixes #2347

* review: use effective_invoke_separator() for Copilot skills mode

Address PR review feedback: instead of bleeding _skills_mode
knowledge into the CLI layer, add effective_invoke_separator()
method to IntegrationBase that accepts parsed_options.

CopilotIntegration overrides it to return "-" when skills
mode is requested. The CLI layer simply asks the integration
for its separator — no hasattr or _skills_mode coupling.

Also adds tests for the new method on both base and Copilot,
plus an end-to-end test for 'specify init --integration copilot
--integration-options --skills' verifying page templates get
hyphen refs.

* fix: build_command_invocation preserves full suffix for extension commands

Previously rsplit('.', 1)[-1] on 'speckit.git.commit' yielded
just 'commit', producing /speckit.commit instead of
/speckit.git.commit (or /speckit-git-commit for skills).

Fix: strip only the 'speckit.' prefix when present, then join
remaining segments with the appropriate separator.

Updated in IntegrationBase, SkillsIntegration, and
CopilotIntegration. Added tests for extension commands in
build_command_invocation across all three.

* fix: Copilot dispatch_command() preserves full extension command suffix

dispatch_command() had the same rsplit('.', 1)[-1] bug as
build_command_invocation() — speckit.git.commit would dispatch
as /speckit-commit instead of /speckit-git-commit in skills
mode, or --agent speckit.commit instead of speckit.git.commit
in default mode.
 2026-04-24 10:04:14 -05:00
Manfred Riem
3970855797 fix: --force now overwrites shared infra files during init and upgrade (#2320) 
* fix: --force now overwrites shared infra files during init and upgrade

_install_shared_infra() previously skipped all existing files under
.specify/scripts/ and .specify/templates/, regardless of --force.
This meant users could never receive upstream fixes to shared scripts
or templates after initial project setup.

Changes:
- Add force parameter to _install_shared_infra(); when True, existing
  files are overwritten with the latest bundled versions
- Wire force=True through specify init --here --force and
  specify integration upgrade --force call sites
- Replace hidden logging.warning with visible console output listing
  skipped files and suggesting --force
- Fix contradictory upgrade docs that claimed --force updated shared
  infra (it didn't) and warned about overwrites (they didn't happen)
- Add 6 tests: unit tests for skip/overwrite/warning behavior, plus
  end-to-end CLI tests for both --force and non-force paths

Fixes #2319

* fix: improve skip warning to suggest specific commands

Address review feedback: the generic '--force' suggestion was
misleading when _install_shared_infra is called from integration
install/switch (which don't have a --force for shared infra).
Now points users to the specific commands that can refresh shared
infra: 'specify init --here --force' or 'specify integration
upgrade --force'.
 2026-04-22 16:40:41 -05:00
Kennedy
22e76995c7 feat: implement preset wrap strategy (#2189) 
* feat: implement strategy: wrap

* fix: resolve merge conflict for strategy wrap correctness

* feat: multi-preset composable wrapping with priority ordering

Implements comment #4 from PR review: multiple installed wrap presets
now compose in priority order rather than overwriting each other.

Key changes:
- PresetResolver.resolve() gains skip_presets flag; resolve_core() wraps
  it to skip tier 2, preventing accidental nesting during replay
- _replay_wraps_for_command() recomposed all enabled wrap presets for a
  command in ascending priority order (innermost-first) after any
  install or remove
- _replay_skill_override() keeps SKILL.md in sync with the recomposed
  command body for ai-skills-enabled projects
- install_from_directory() detects strategy: wrap commands, stores
  wrap_commands in the registry entry, and calls replay after install
- remove() reads wrap_commands before deletion, removes registry entry
  before rmtree so replay sees post-removal state, then replays
  remaining wraps or unregisters when none remain

Tests: TestResolveCore (5), TestReplayWrapsForCommand (5),
TestInstallRemoveWrapLifecycle (5), plus 2 skill/alias regression tests

* fix: resolve extension commands via manifest file mapping

PresetResolver.resolve_extension_command_via_manifest() consults each
installed extension.yml to find the actual file declared for a command
name, rather than assuming the file is named <cmd_name>.md.  This fixes
_substitute_core_template for extensions like selftest where the manifest
maps speckit.selftest.extension → commands/selftest.md.

Resolution order in _substitute_core_template is now:
  1. resolve_core(cmd_name) — project overrides win, then name-based lookup
  2. resolve_extension_command_via_manifest(cmd_name) — manifest fallback
  3. resolve_core(short_name) — core template short-name fallback

Path traversal guard mirrors the containment check already present in
ExtensionManager to reject absolute paths or paths escaping the extension
root.

* fix: add bundled core_pack as Priority 5 in PresetResolver.resolve()

resolve_core() was returning None for built-in commands (implement,
specify, etc.) because PresetResolver only checked .specify/templates/
commands/ (Priority 4), which is never populated for commands in a
normal project. strategy:wrap presets rely on resolve_core() to fetch
the {CORE_TEMPLATE} body, so the wrap was silently skipped and SKILL.md
was never updated.

Priority 5 now checks core_pack/commands/ (wheel install) or
repo_root/templates/commands/ (source checkout), mirroring the pattern
used by _locate_core_pack() elsewhere.

Updated two tests whose assertions assumed resolve_core() always
returned None when .specify/templates/commands/ was absent.

* fix: harden preset wrap replay removal

* fix: stabilize existing directory error output

* fix: track outermost_pack_id from contributing preset; use Path.parts in tests

- outermost_pack_id now updates alongside outermost_frontmatter inside
  the wrap loop, so it reflects the actual last contributing preset
  rather than always taking wrap_presets[0] (which may have been skipped)
- Replace str(path) substring checks in TestResolveCore with Path.parts
  tuple comparisons for correct behaviour on Windows (CI runs windows-latest)

* fix: guard against non-mapping YAML manifests; apply integration post-processing in replay

- ExtensionManifest._load raises ValidationError for non-dict YAML roots instead of TypeError
- PresetManager._replay_wraps_for_command calls integration.post_process_skill_content,
  matching _register_skills behaviour
- PresetResolver skips extensions that raise OSError/TypeError/AttributeError on manifest load
- Tests: non-mapping YAML, OSError manifest skip, and replay integration post-processing
 2026-04-21 15:02:31 -05:00
Manfred Riem
fc3d1244c0 fix: replace shell-based context updates with marker-based upsert (#2259) 
* Replace shell-based context updates with marker-based upsert

Replace ~3500 lines of bash/PowerShell agent context update scripts
with a Python-based approach using <!-- SPECKIT START/END --> markers.

IntegrationBase now manages the agent context file directly:
- upsert_context_section(): creates or updates the marked section at
  init/install/switch time with a directive to read the current plan
- remove_context_section(): removes the section at uninstall, deleting
  the file only if it becomes empty
- __CONTEXT_FILE__ placeholder in command templates is resolved per
  integration so the plan command references the correct agent file
- context_file is persisted in init-options.json for extension access

The plan command template instructs the LLM to update the plan
reference between the markers in the agent context file.

Removed:
- scripts/bash/update-agent-context.sh (857 lines)
- scripts/powershell/update-agent-context.ps1 (515 lines)
- 56 integration wrapper scripts (update-context.sh/.ps1)
- templates/agent-file-template.md
- agent_scripts frontmatter key and {AGENT_SCRIPT} replacement logic
- update-context reference from integration.json
- tests/test_cursor_frontmatter.py (tested deleted scripts)

Added:
- upsert/remove context section methods on IntegrationBase
- __CONTEXT_FILE__ placeholder support in process_template()
- context_file field in init-options.json (init/switch/uninstall)
- Per-integration tests: context file correctness, plan reference,
  init-options persistence (78 new context_file tests)
- End-to-end CLI validation across all 28 integrations

* fix: search for end marker after start marker in context section methods

Address Copilot review: content.find(CONTEXT_MARKER_END) searched from
the start of the file rather than after the located start marker. If
the file contained a stray end marker before the start marker, the
wrong slice could be replaced.

Now both upsert_context_section() and remove_context_section() pass
start_idx as the second argument to find() and validate end_idx >
start_idx before performing the replacement.

* fix: address Copilot review feedback on context section handling

1. Fix grammar in _build_context_section() directive text — add commas
   for a complete sentence.

2. Resolve __CONTEXT_FILE__ in resolve_skill_placeholders() — skills
   generated via extensions/presets for codex/kimi now replace the
   placeholder using the context_file value from init-options.json.

3. Handle Cursor .mdc frontmatter — when creating a new .mdc context
   file, prepend alwaysApply: true YAML frontmatter so Cursor
   auto-loads the rules.

4. Fix empty-file leading newline — when the context file exists but
   is empty, write the section directly instead of prepending a blank
   line.

* fix: address second round of Copilot review feedback

1. Ensure .mdc frontmatter on existing files — upsert_context_section()
   now checks for missing YAML frontmatter on .mdc files during updates
   (not just creation), so pre-existing Cursor files get alwaysApply.

2. Guard against context_file=None — use 'or ""' instead of a default
   arg so explicit null values in init-options.json don't cause a
   TypeError in str.replace().

3. Clean up .mdc files on removal — remove_context_section() treats
   files containing only the Speckit-generated frontmatter block as
   empty, deleting them rather than leaving orphaned frontmatter.

* fix: address third round of Copilot review feedback

1. CRLF-safe .mdc frontmatter check — use lstrip().startswith('---')
   instead of startswith('---\n') so CRLF files don't get duplicate
   frontmatter.

2. CRLF-safe .mdc removal check — normalize line endings before
   comparing against the sentinel frontmatter string.

3. Call remove_context_section() during integration_uninstall() — the
   manifest-only uninstall was leaving the managed SPECKIT markers
   behind in the agent context file.

4. Fix stale docstring — remove 'agent_scripts' mention from
   test_lean_commands_have_no_scripts().

* fix: address fourth round of Copilot review feedback

1. Remove unused script_type parameter from _write_integration_json()
   and all 3 call sites — the parameter was no longer referenced after
   the update-context script removal.

2. Fix _build_context_section() docstring — correct example path from
   '.specify/plans/plan.md' to 'specs/<feature>/plan.md'.

3. Improve .mdc frontmatter-only detection in remove_context_section()
   — use regex to match any YAML frontmatter block (not just the exact
   Speckit-generated one), so .mdc files with additional frontmatter
   keys are also cleaned up when no body content remains.

* fix: handle corrupted markers and parse .mdc frontmatter robustly

1. Handle partial/corrupted markers in upsert_context_section() —
   if only the START marker exists (no END), replace from START
   through EOF. If only the END marker exists, replace from BOF
   through END. This keeps upsert idempotent even when a user
   accidentally deletes one marker.

2. Parse .mdc YAML frontmatter properly — new _ensure_mdc_frontmatter()
   helper parses existing frontmatter and ensures alwaysApply: true is
   set, rather than just checking for the --- delimiter. Handles
   missing frontmatter, existing frontmatter without alwaysApply, and
   already-correct frontmatter.

* fix: preserve .mdc frontmatter, add tests, clean up on switch

1. Rewrite _ensure_mdc_frontmatter() with regex — preserves comments,
   formatting, and custom keys in existing frontmatter instead of
   destructively re-serializing via yaml.safe_dump(). Inserts or
   fixes alwaysApply: true in place.

2. Add 6 focused .mdc frontmatter tests to cursor-agent test file:
   new file creation, missing frontmatter, preserved custom keys,
   wrong alwaysApply value, idempotent upserts, removal cleanup.

3. Call remove_context_section() during integration switch Phase 1 —
   prevents stale SPECKIT markers from being left in the old
   integration's context file. Also clear context_file from
   init-options during the metadata reset.

* fix: remove unused MDC_FRONTMATTER, preserve inline comments, normalize bare CR

1. Remove unused MDC_FRONTMATTER class variable — dead code after
   _ensure_mdc_frontmatter() was rewritten with regex.

2. Preserve inline comments when fixing alwaysApply — the regex
   substitution now captures trailing '# comment' text and keeps it.

3. Normalize bare CR in upsert_context_section() — match the
   behavior of remove_context_section() which already normalizes
   both CRLF and bare CR.

4. Clarify .mdc removal comment — 'treat frontmatter-only as empty'
   instead of misleading 'strip frontmatter'.

* fix: handle corrupted markers in remove, CRLF-safe end-marker consumption

1. Handle corrupted markers in remove_context_section() — mirror
   upsert's behavior: start-only removes start→EOF, end-only removes
   BOF→end. Previously bailed out leaving partial markers behind.

2. CRLF-safe end-marker consumption — both upsert and remove now
   handle \r\n after the end marker, not just \n. Prevents extra
   blank lines at replacement boundaries in CRLF files.

3. Clarify path rule in plan template — distinguish filesystem
   operations (absolute paths) from documentation/agent context
   references (project-relative paths).

* fix: only remove context section when both markers are well-ordered

remove_context_section() previously treated mismatched markers as
corruption and aggressively removed from BOF→end-marker or
start-marker→EOF, which could delete user-authored content if only
one marker remained. Now it only removes when both START and END
markers exist and are properly ordered, returning False otherwise.
 2026-04-17 13:57:51 -05:00
Manfred Riem
39c7b04e5e chore: deprecate --ai flag in favor of --integration on specify init (#2218) 
* chore: deprecate --ai flag in favor of --integration on specify init

- Adds deprecation warning when --ai is used
- Shows equivalent --integration command replacement
- Handles generic integration with --commands-dir mapping
- Adds comprehensive test coverage for deprecation behavior
- Warning displays as prominent red panel above Next Steps
- --ai flag continues to function (non-breaking change)

Fixes #2169

* Address PR review feedback for issue #2169

- Use existing strip_ansi helper from conftest instead of duplicating ANSI escape pattern
- Properly escape ai_commands_dir with shlex.quote() to handle paths with spaces
- Add shlex import to support proper command-line argument escaping
 2026-04-14 15:12:27 -05:00
Manfred Riem
2972dec85c feat: Git extension stage 2 — GIT_BRANCH_NAME override, --force for existing dirs, auto-install tests (#1940) (#2117) 
* feat: Git extension stage 2 — GIT_BRANCH_NAME override, --force for existing dirs, auto-install tests (#1940)

- Add GIT_BRANCH_NAME env var override to create-new-feature.sh/.ps1
  for exact branch naming (bypasses all prefix/suffix generation)
- Fix --force flag for 'specify init <dir>' into existing directories
- Add TestGitExtensionAutoInstall tests (auto-install, --no-git skip,
  commands registered)
- Add TestFeatureDirectoryResolution tests (env var, feature.json,
  priority, branch fallback)
- Document GIT_BRANCH_NAME in speckit.git.feature.md and specify.md

* fix: remove unused Tuple import (ruff F401)

* fix: address Copilot review feedback (#2117)

- Fix timestamp regex ordering: check YYYYMMDD-HHMMSS before generic
  numeric prefix in both bash and PowerShell
- Set BRANCH_SUFFIX in GIT_BRANCH_NAME override path so 244-byte
  truncation logic works correctly
- Add 244-byte length check for GIT_BRANCH_NAME in PowerShell
- Use existing_items for non-empty dir warning with --force
- Skip git extension install if already installed (idempotent --force)
- Wrap PowerShell feature.json parsing in try/catch for malformed JSON
- Fix PS comment: 'prefix lookup' -> 'exact mapping via Get-FeatureDir'
- Remove non-functional SPECIFY_SPEC_DIRECTORY from specify.md template

* fix: address second round of Copilot review feedback (#2117)

- Guard shutil.rmtree on init failure: skip cleanup when --force merged
  into a pre-existing directory (prevents data loss)
- Bash: error on GIT_BRANCH_NAME >244 bytes instead of broken truncation
- Fix malformed numbered list in specify.md (restore missing step 1)
- Add claude_skills.exists() assert before iterdir() in test

* fix: use UTF-8 byte count for 244-byte branch name limit (#2117)

- Bash: use LC_ALL=C wc -c for byte length instead of ${#VAR}
- PowerShell: use [System.Text.Encoding]::UTF8.GetByteCount() instead
  of .Length (UTF-16 code units)

* fix: address third round of review feedback (#2117)

- Update --dry-run help text in bash and PowerShell (branch name only)
- Fix specify.md JSON example: use concrete path, not literal variable
- Add TestForceExistingDirectory tests (merge + error without --force)
- Add PowerShell Get-FeaturePathsEnv tests (env var + feature.json)

* fix: normalize relative paths and fix Test-HasGit compat (#2117)

- Bash common.sh: normalize SPECIFY_FEATURE_DIRECTORY and feature.json
  relative paths to absolute under repo root
- PowerShell common.ps1: same normalization using IsPathRooted + Join-Path
- PowerShell create-new-feature.ps1: call Test-HasGit without -RepoRoot
  for compatibility with core common.ps1 (no param) and git-common.ps1
  (optional param with default)

* test: add GIT_BRANCH_NAME automated tests for bash and PowerShell (#2117)

- TestGitBranchNameOverrideBash: 5 tests (exact name, sequential prefix,
  timestamp prefix, overlong rejection, dry-run)
- TestGitBranchNameOverridePowerShell: 4 tests (exact name, sequential
  prefix, timestamp prefix, overlong rejection)
- Tests use extension scripts (not core) via new ext_git_repo and
  ext_ps_git_repo fixtures

* fix: restore git init during specify init + review fixes (#2117)

- Restore is_git_repo() and init_git_repo() functions removed in stage 2
- specify init now runs git init AND installs git extension (not just
  extension install alone)
- Add is_dir() guard for non-here path to prevent uncontrolled error
  when target exists but is a file
- Add python3 JSON fallback in common.sh for multi-line feature.json
  (grep pipeline fails on pretty-printed JSON without jq)

* fix: use init_git_repo error_msg in failure output (#2117)

* fix: ensure_executable_scripts also covers .specify/extensions/ (#2117)

Extension .sh scripts (e.g. create-new-feature.sh, initialize-repo.sh)
may lack execute bits after install. Scan both .specify/scripts/ and
.specify/extensions/ for permission fixing.

* fix: move chmod after extension install + sanitize error_msg (#2117)

- ensure_executable_scripts() now runs after git extension install so
  extension .sh files get execute bits in the same init run
- Sanitize init_git_repo error_msg to single line (replace newlines,
  truncate to 120 chars) to prevent garbled StepTracker output

* fix: use tracker.error for git init/extension failures (#2117)

Git init failure and extension install failure were reported as
tracker.complete (showing green) even on error. Now track a
git_has_error flag and call tracker.error when any step fails,
so the UI correctly reflects the failure state.

* fix: sanitize ext_err in git step tracker for consistent rendering (#2117)
 2026-04-08 13:48:36 -05:00
Manfred Riem
b1832c9477 Stage 6: Complete migration — remove legacy scaffold path (#1924) (#2063) 
* Stage 6: Complete migration — remove legacy scaffold path (#1924)

Remove the legacy GitHub download and offline scaffold code paths.
All 26 agents now use the integration system exclusively.

Code removal (~1073 lines from __init__.py):
- download_template_from_github(), download_and_extract_template()
- scaffold_from_core_pack(), _locate_release_script()
- install_ai_skills(), _get_skills_dir (restored slim version for presets)
- _has_bundled_skills(), _migrate_legacy_kimi_dotted_skills()
- AGENT_SKILLS_MIGRATIONS, _handle_agent_skills_migration()
- _parse_rate_limit_headers(), _format_rate_limit_error()
- Three-way branch in init() collapsed to integration-only

Config derivation (single source of truth):
- AGENT_CONFIG derived from INTEGRATION_REGISTRY (replaced 180-line dict)
- CommandRegistrar.AGENT_CONFIGS derived from INTEGRATION_REGISTRY (replaced 160-line dict)
- Backward-compat constants kept for presets/extensions: SKILL_DESCRIPTIONS,
  NATIVE_SKILLS_AGENTS, DEFAULT_SKILLS_DIR

Release pipeline cleanup:
- Deleted create-release-packages.sh/.ps1 (948 lines of ZIP packaging)
- Deleted create-github-release.sh, generate-release-notes.sh
- Deleted simulate-release.sh, get-next-version.sh, update-version.sh
- Removed .github/workflows/scripts/ directory entirely
- release.yml is now self-contained: check, notes, release all inlined
- Install instructions use uv tool install with version tag

Test cleanup:
- Deleted test_ai_skills.py (tested removed functions)
- Deleted test_core_pack_scaffold.py (tested removed scaffold)
- Cleaned test_agent_config_consistency.py (removed 19 release-script tests)
- Fixed test_branch_numbering.py (removed dead monkeypatches)
- Updated auto-promote tests (verify files created, not tip messages)

1089 tests pass, 0 failures, ruff clean.

* fix: resolve merge conflicts with #2051 (claude as skills)

- Fix circular import: move CommandRegistrar import in claude
  integration to inside method bodies (was at module level)
- Lazy-populate AGENT_CONFIGS via _ensure_configs() to avoid
  circular import at class definition time
- Set claude registrar_config to .claude/commands (extension/preset
  target) since the integration handles .claude/skills in setup()
- Update tests from #2051 to match: registrar_config assertions,
  remove --integration tip assertions, remove install_ai_skills mocks

1086 tests pass.

* fix: properly preserve claude skills migration from #2051

Restore ClaudeIntegration.registrar_config to .claude/skills (not
.claude/commands) so extension/preset registrations write to the
correct skills directory.

Update tests that simulate claude setup to use .claude/skills and
check for SKILL.md layout. Some tests still need updating for the
full skills path — 10 remaining failures from the #2051 test
expectations around the extension/preset skill registration flow.

WIP: 1076/1086 pass.

* fix: properly handle SKILL.md paths in extension update rollback and tests

Fix extension update rollback using _compute_output_name() for SKILL.md
agents (converts dots to hyphens in skill directory names). Previously
the backup and cleanup code constructed paths with raw command names
(e.g. speckit.test-ext.hello/SKILL.md) instead of the correct computed
names (speckit-test-ext-hello/SKILL.md).

Test fixes for claude skills migration:
- Update claude tests to use .claude/skills paths and SKILL.md layout
- Use qwen (not claude) for skills-guard tests since claude's agent dir
  IS the skills dir — creating it triggers command registration
- Fix test_extension_command_registered_when_extension_present to check
  skills path format

1086 tests pass, 0 failures, ruff clean.

* fix: address PR review — lazy init, assertions, deprecated flags

- _ensure_configs(): catch ImportError (not Exception), don't set
  _configs_loaded on failure so retries work
- Move _ensure_configs() before unregister loop (not inside it)
- Module-level try/except catches ImportError specifically
- Remove tautology assertion (or True) in test_extensions.py
- Strengthen preset provenance assertion to check source: field
- Mark --offline, --skip-tls, --debug, --github-token as hidden
  deprecated no-ops in init()

1086 tests pass.

* fix: remove deleted release scripts from pyproject.toml force-include

Removes force-include entries for create-release-packages.sh/.ps1
which were deleted but still referenced in [tool.hatch.build].
 2026-04-02 12:34:34 -05:00
Andrii Furmanets
a858c1d6da Install Claude Code as native skills and align preset/integration flows (#2051) 
* Use Claude skills for generated commands

* Fix Claude integration and preset skill flows

* Group Claude tests in integration suite

* Align Claude skill frontmatter across generators

* Fix native skill preset cleanup

* Keep legacy AI skills test on legacy path

* Move Claude here-mode test to CLI suite
 2026-04-02 09:44:48 -05:00
Manfred Riem
4f9d966beb Stage 5: Skills, Generic & Option-Driven Integrations (#1924) (#2052) 
* Stage 5: Skills, Generic & Option-Driven Integrations (#1924)

Add SkillsIntegration base class and migrate codex, kimi, agy, and
generic to the integration system.

Integrations:
- SkillsIntegration(IntegrationBase) in base.py — creates
  speckit-<name>/SKILL.md layout matching release ZIP output byte-for-byte
- CodexIntegration — .agents/skills/, --skills default=True
- KimiIntegration — .kimi/skills/, --skills + --migrate-legacy options,
  dotted→hyphenated skill directory migration
- AgyIntegration — .agent/skills/, skills-only (commands deprecated v1.20.5)
- GenericIntegration — user-specified --commands-dir, MarkdownIntegration
- All four have update-context.sh/.ps1 scripts
- All four registered in INTEGRATION_REGISTRY

CLI changes:
- --ai <agent> auto-promotes to integration path for all registered agents
- Interactive agent selection also auto-promotes (bug fix)
- --ai-skills and --ai-commands-dir show deprecation notices on integration path
- Next-steps display shows correct skill invocation syntax for skills integrations
- agy added to CommandRegistrar.AGENT_CONFIGS

Tests:
- test_integration_base_skills.py — reusable mixin with setup, frontmatter,
  directory structure, scripts, CLI auto-promote, and complete file inventory
  (sh+ps) tests
- Per-agent test files: test_integration_{codex,kimi,agy,generic}.py
- Kimi legacy migration tests, generic --commands-dir validation
- Registry updated with Stage 5 keys
- Removed 9 dead-mock tests, moved 4 integration tests to proper locations
- Fixed all bare project-name tests to use tmp_path
- Fixed 6 pre-existing ANSI escape code test failures in test_extensions.py
  and test_presets.py

1524 tests pass, 0 failures.

* fix: remove unused variable flagged by ruff (F841)

* fix: address PR review — integration-type-aware deprecation messages and early generic validation

- --ai-skills deprecation message now distinguishes SkillsIntegration
  ("skills are the default") from command-based integrations ("has no effect")
- --ai-commands-dir validation for generic runs even when auto-promoted,
  giving clear CLI error instead of late ValueError from setup()
- Resolves review comments from #2052

* fix: address PR review round 2

- Remove unused SKILL_DESCRIPTIONS dict from base.py (dead code after
  switching to template descriptions for ZIP parity)
- Narrow YAML parse catch from Exception to yaml.YAMLError
- Remove unused shutil import from test_integration_kimi.py
- Remove unused _REGISTRAR_EXEMPT class attr from test_registry.py
- Reword --ai-commands-dir deprecation to be actionable
- Update generic validation error to mention both --ai and --integration

* fix: address PR review round 3

- Clarify parsed_options forwarding is intentional (all options passed,
  integrations decide what to use)
- Extract _strip_ansi() helper in test_extensions.py and test_presets.py
- Remove unused pytest import (test_cli.py), unused locals (test_integration_base_skills.py)
- Reword --ai-commands-dir deprecation to be actionable without referencing
  the not-yet-implemented --integration-options

* fix: address PR review round 4

- Reorder kimi migration: run super().setup() first so hyphenated
  targets exist, then migrate dotted dirs (prevents user content loss)
- Move _strip_ansi() to shared tests/conftest.py, import from there
  in test_extensions.py, test_presets.py, test_ai_skills.py
- Remove now-unused re imports from all three test files

* fix: address PR review round 5

- Use write_bytes() for LF-only newlines (no CRLF on Windows)
- Add --integration-options CLI parameter — raw string passed through
  to the integration via opts['raw_options']; the integration owns
  parsing of its own options
- GenericIntegration.setup() reads --commands-dir from raw_options
  when not in parsed_options (supports --integration-options="...")
- Skip early --ai-commands-dir validation when --integration-options
  is provided (integration validates in its own setup())
- Remove parse_integration_options from core — integrations parse
  their own options

* fix: address PR review round 6

- GenericIntegration is now stateless: removed self._commands_dir
  instance state, overrides setup() directly to compute destination
  from parsed_options/raw_options on the stack
- commands_dest() raises by design (stateless singleton)
- _quote() in SkillsIntegration now escapes backslashes and double
  quotes to produce valid YAML even with special characters

* fix: address PR review round 7

- Support --commands-dir=value form in raw_options parsing (not just
  --commands-dir value with space separator)
- Normalize CRLF to LF in write_file_and_record() before encoding
- Persist ai_skills=True in init-options.json when using a
  SkillsIntegration, so extensions/presets emit SKILL.md overrides
  correctly even without explicit --ai-skills flag
 2026-04-02 08:00:12 -05:00
Manfred Riem
3899dcc0d4 Stage 2: Copilot integration — proof of concept with shared template primitives (#2035) 
* feat: Stage 2a — CopilotIntegration with shared template primitives

- base.py: added granular primitives (shared_commands_dir,
  shared_templates_dir, list_command_templates, command_filename,
  commands_dest, copy_command_to_directory, record_file_in_manifest,
  write_file_and_record, process_template)
- CopilotIntegration: uses primitives to produce .agent.md commands,
  companion .prompt.md files, and .vscode/settings.json
- Verified byte-for-byte parity with old release script output
- Copilot auto-registered in INTEGRATION_REGISTRY
- 70 tests (22 new: base primitives + copilot integration)

Part of #1924

* feat: Stage 2b — --integration flag, routing, agent.json, shared infra

- Added --integration flag to init() (mutually exclusive with --ai)
- --ai copilot auto-promotes to integration path with migration nudge
- Integration setup writes .specify/agent.json with integration key
- _install_shared_infra() copies scripts and templates to .specify/
- init-options.json records 'integration' key when used
- 4 new CLI tests: mutual exclusivity, unknown rejection, copilot
  end-to-end, auto-promote (74 total integration tests)

Part of #1924

* feat: Stage 2 completion — integration scripts, integration.json, shared manifest

- Added copilot/scripts/update-context.sh and .ps1 (thin wrappers
  that delegate to the shared update-agent-context script)
- CopilotIntegration.setup() installs integration scripts to
  .specify/integrations/copilot/scripts/
- Renamed agent.json → integration.json with script paths
- _install_shared_infra() now tracks files in
  integration-shared.manifest.json
- Updated tests: scripts installed, integration.json has script paths,
  shared manifest recorded (74 tests)

Part of #1924

* refactor: rename shared manifest to speckit.manifest.json

Cleaner naming — the shared infrastructure (scripts, templates)
belongs to spec-kit itself, not to any specific integration.

* fix: copilot update-context scripts reflect target architecture

Scripts now source shared functions (via SPECKIT_SOURCE_ONLY=1) and
call update_agent_file directly with .github/copilot-instructions.md,
rather than delegating back to the shared case statement.

* fix: simplify copilot scripts — dispatcher sources common functions

Integration scripts now contain only copilot-specific logic (target
path + agent name). The dispatcher is responsible for sourcing shared
functions before calling the integration script.

* fix: copilot update-context scripts are self-contained implementations

These scripts ARE the implementation — the dispatcher calls them.
They source common.sh + update-agent-context functions, gather
feature/plan data, then call update_agent_file with the copilot
target path (.github/copilot-instructions.md).

* docs: add Stage 7 activation note to copilot update-context scripts

* test: add complete file inventory test for copilot integration

Validates every single file (37 total) produced by
specify init --integration copilot --script sh --no-git.

* test: add PowerShell file inventory test for copilot integration

Validates all 37 files produced by --script ps variant, including
.specify/scripts/powershell/ instead of bash.

* refactor: split test_integrations.py into tests/integrations/ directory

- test_base.py: IntegrationOption, IntegrationBase, MarkdownIntegration, primitives
- test_manifest.py: IntegrationManifest, path traversal, persistence, validation
- test_registry.py: INTEGRATION_REGISTRY
- test_copilot.py: CopilotIntegration unit tests
- test_cli.py: --integration flag, auto-promote, file inventories (sh + ps)
- conftest.py: shared StubIntegration helper

76 integration tests + 48 consistency tests = 124 total, all passing.

* refactor: move file inventory tests from test_cli to test_copilot

File inventories are copilot-specific. test_cli.py now only tests
CLI flag mechanics (mutual exclusivity, unknown rejection, auto-promote).

* fix: skip JSONC merge to preserve user settings, fix docstring

- _merge_vscode_settings() now returns early (skips merge) when
  existing settings.json can't be parsed (e.g. JSONC with comments),
  instead of overwriting with empty settings
- Updated _install_shared_infra() docstring to match implementation
  (scripts + templates, speckit.manifest.json)

* fix: warn user when JSONC settings merge is skipped

* fix: show template content when JSONC merge is skipped

User now sees the exact settings they should add manually.

* fix: document process_template requirement, merge scripts without rmtree

- base.py setup() docstring now explicitly states raw copy behavior
  and directs to CopilotIntegration for process_template example
- _install_shared_infra() uses merge/overwrite instead of rmtree to
  preserve user-added files under .specify/scripts/

* fix: don't overwrite pre-existing shared scripts or templates

Only write files that don't already exist — preserves any user
modifications to shared scripts (common.sh etc.) and templates.

* fix: warn user about skipped pre-existing shared files

Lists all shared scripts and templates that were not copied because
they already existed in the project.

* test: add test for shared infra skip behavior on pre-existing files

Verifies that _install_shared_infra() preserves user-modified scripts
and templates while still installing missing ones.

* fix: address review — containment check, deterministic prompts, manifest accuracy

- CopilotIntegration.setup() adds dest containment check (relative_to)
- Companion prompts generated from templates list, not directory glob
- _install_shared_infra() only records files actually copied (not pre-existing)
- VS Code settings tests made unconditional (assert template exists)
- Inventory tests use .as_posix() for cross-platform paths

* fix: correct PS1 function names, document SPECKIT_SOURCE_ONLY prerequisite

- Fixed Get-FeaturePaths → Get-FeaturePathsEnv, Read-PlanData → Parse-PlanData
- Documented that shared scripts must guard Main with SPECKIT_SOURCE_ONLY
  before these integration scripts can be activated (Stage 7)

* fix: add dict type check for settings merge, simplify PS1 to subprocess

- _merge_vscode_settings() skips merge with warning if parsed JSON
  is not a dict (array, null, etc.)
- PS1 update-context.ps1 uses & invocation instead of dot-sourcing
  since the shared script runs Main unconditionally

* fix: skip-write on no-op merge, bash subprocess, dynamic integration list

- _merge_vscode_settings() only writes when keys were actually added
- update-context.sh uses exec subprocess like PS1 version
- Unknown integration error lists available integrations dynamically

* fix: align path rewriting with release script, add .specify/.specify/ fix

Path rewrite regex matches the release script's rewrite_paths()
exactly (verified byte-identical output). Added .specify/.specify/
double-prefix fix for additional safety.
 2026-03-31 17:40:32 -05:00