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eabfabb490b6930dbe65cd962f64afae27f02eff
438 Commits
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eabfabb490 |
[bug-fix] Fix reinstall-overwrites-kept-config: preserve config on plain reinstall after --keep-config (#3449)
* Fix reinstall-overwrites-kept-config: preserve config on plain reinstall after --keep-config Apply the remediation from the bug assessment on issue #3427. Before the unconditional shutil.rmtree(dest_dir), scan dest_dir for any *-config.yml and *-config.local.yml files and hold their contents in memory. After shutil.copytree succeeds, write them back so user-customized values always win over the packaged defaults. This mirrors the existing backup/restore logic for the --force reinstall path but handles the case where remove --keep-config left config files behind in an unregistered extension directory. Refs #3427 Assisted-by: GitHub Copilot (model: claude-sonnet-4.6, autonomous) Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * fix: restore method decl, move config restore before registration, preserve file mode - Restore missing `test_install_force_without_existing` method declaration in tests/test_extensions.py so pytest collects it as a separate test. - Move stranded-config restoration to immediately after `copytree`, before command/skill/hook registration, so a failed registration step can't leave preserved configs permanently lost. - Store `(bytes, mode)` tuples instead of bare bytes when rescuing stranded configs, and reapply the original file mode after writing so permission bits (e.g. 0600 for credential files) are faithfully restored. Assisted-by: GitHub Copilot (model: claude-sonnet-4.5, autonomous) * fix: mask setuid/setgid bits when restoring stranded config file mode Only preserve user/group read-write bits (mode & 0o660) to avoid restoring setuid, setgid, or world-writable permissions from a user-modified config file. Assisted-by: GitHub Copilot (model: claude-sonnet-4.5, autonomous) * fix: add copytree rollback path and strengthen regression test with packaged default config - Wrap shutil.copytree in a try/except BaseException so stranded configs rescued before rmtree are written back even if copytree fails mid-way (addresses review comment: configs were permanently lost on copy failure) - Add a packaged default config to extension_dir in the regression test so a naive 'restore only when absent' implementation would fail; assert the user's customized values beat the packaged defaults after reinstall Assisted-by: GitHub Copilot (model: claude-sonnet-4.6, autonomous) * fix: restore configs with secure atomic writes Assisted-by: GitHub Copilot (model: gpt-5, autonomous) * fix: write secure temp file then chmod to preserved_mode; add copytree-failure test - _restore_stranded_config_file: write content while temp file is at its secure OS-default mode (typically 0600 on POSIX), then apply the original preserved_mode after the file is fully written and before the atomic os.replace. Removes the & 0o660 mask that was silently stripping world-read and executable bits (e.g. 0644 → 0640). - Add test_copytree_failure_restores_stranded_config: patches shutil.copytree to create a partial destination then raise OSError, then asserts that the preserved config bytes and file mode are restored by the rollback path and that the extension remains unregistered. Assisted-by: GitHub Copilot (model: claude-sonnet-4.6, autonomous) * Potential fix for pull request finding 'Unused local variable' Co-authored-by: Copilot Autofix powered by AI <223894421+github-code-quality[bot]@users.noreply.github.com> * Potential fix for pull request finding 'Module is imported with 'import' and 'import from'' Co-authored-by: Copilot Autofix powered by AI <223894421+github-code-quality[bot]@users.noreply.github.com> * fix: durable staging for stranded configs and import style fix - Stage stranded config files to a durable rescue_staging_dir (extensions_dir/.rescue-staging-<id>) before rmtree so original bytes survive partial rmtree, copytree failure, or partial restore on retry. On retry the staging dir is detected and its content reused instead of whatever mix of packaged defaults and partial restores remains on disk. The staging dir is cleaned up only after every restore succeeds. - Fix CodeQL: change `import specify_cli.extensions as _ext_module` to `from specify_cli import extensions as _ext_module` in test file. Assisted-by: GitHub Copilot (model: claude-sonnet-4.6, autonomous) * fix: harden rescue staging dir - symlink checks, secure writes, cleanup errors - Thread 14: Change except BaseException to except Exception in the staging fallback block so KeyboardInterrupt/SystemExit propagate correctly - Thread 15: Add explanatory comment to the bare pass in the chmod except block to satisfy static analysis - Thread 16: Reject a symlinked staging directory and only reload non-symlinked files whose names match the two recognised config suffixes - Thread 17: Create each staging file via os.open with mode 0600 and O_CREAT|O_EXCL before writing so preserved bytes are never transiently exposed to other local users - Thread 18: Remove ignore_errors=True from the final staging-dir cleanup so a failed rmtree propagates rather than silently leaving a stale backup that could be misread on the next retry Assisted-by: GitHub Copilot (model: claude-sonnet-4.6, autonomous) * fix: mask file-type bits from chmod, harden staging dir symlink check - Add `import stat` to imports - Use `stat.S_IMODE(mode)` before chmod in staging write (thread 20, line 1464) - Use `stat.S_IMODE(preserved_mode)` and make chmod best-effort in `_restore_stranded_config_file` (thread 18, line 1492) - Add `not rescue_staging_dir.is_symlink()` guard to cleanup (thread 19, line 1522) Assisted-by: GitHub Copilot (model: claude-sonnet-4.6, autonomous) * fix: use completion marker for rescue staging, abort on staging failure, full os.write Assisted-by: GitHub Copilot (model: GPT-5.3-Codex, autonomous) * fix(extensions): make rescue staging durable Assisted-by: GitHub Copilot (model: MAI-Code-1-Flash, autonomous) Co-authored-by: Copilot App <223556219+Copilot@users.noreply.github.com> * test(extensions): fix flaky copytree regression test Assisted-by: GitHub Copilot (model: MAI-Code-1-Flash, autonomous) Co-authored-by: Copilot App <223556219+Copilot@users.noreply.github.com> * test(extensions): fix module import alias for review feedback Assisted-by: GitHub Copilot (model: MAI-Code-1-Flash, autonomous) Co-authored-by: Copilot App <223556219+Copilot@users.noreply.github.com> * fix(workflows): keep cleanup warnings single-line and remove dead helper Assisted-by: GitHub Copilot (model: MAI-Code-1-Flash, autonomous) Co-authored-by: Copilot App <223556219+Copilot@users.noreply.github.com> * Potential fix for pull request finding 'Module is imported with 'import' and 'import from'' Co-authored-by: Copilot Autofix powered by AI <223894421+github-code-quality[bot]@users.noreply.github.com> * Preserve rescued extension config across retry Assisted-by: GitHub Copilot (model: MAI-Code-1-Flash, autonomous) Co-authored-by: Copilot App <223556219+Copilot@users.noreply.github.com> * Clarify ignored directory fsync cleanup errors Assisted-by: GitHub Copilot (model: MAI-Code-1-Flash, autonomous) Co-authored-by: Copilot App <223556219+Copilot@users.noreply.github.com> * Fix reinstall durability and workflow cleanup warnings Assisted-by: GitHub Copilot (model: MAI-Code-1-Flash, autonomous) Co-authored-by: Copilot App <223556219+Copilot@users.noreply.github.com> * Open rescue staging file in binary mode to fix Windows CRLF corruption On Windows os.open() defaults to text mode, so os.write() of preserved config bytes containing \r\n was translated to \r\r\n, corrupting the staged backup and failing the retry-restore regression test. Add O_BINARY (0 on POSIX) to the staging file open flags. Assisted-by: GitHub Copilot (model: Claude Opus 4.8, autonomous) Co-authored-by: Copilot App <223556219+Copilot@users.noreply.github.com> * Load .extensionignore before deleting dest_dir on reinstall The .extensionignore loader can raise ValidationError (invalid UTF-8) or OSError. Previously it ran after dest_dir was removed, so such a failure left the kept config only in the hidden staging directory rather than its documented location. Load/validate it before the rmtree so every post-deletion failure path restores the config. Adds a regression test. Assisted-by: GitHub Copilot (model: Claude Opus 4.8, autonomous) Co-authored-by: Copilot App <223556219+Copilot@users.noreply.github.com> * Validate .extensionignore before publishing rescue staging Loading .extensionignore after the rescue staging directory was published meant a validation failure left a complete staging copy behind. A later retry (after the user fixed the ignore file and edited the kept config) would reload the stale staged bytes and silently overwrite the newer config. Move the loader ahead of reading/creating rescue staging so a failure aborts while the kept config is still authoritative on disk, and extend the regression test to prove no staging is published and a retry adopts the newer bytes. Assisted-by: GitHub Copilot (model: Claude Opus 4.8, autonomous) Co-authored-by: Copilot App <223556219+Copilot@users.noreply.github.com> * Harden preserved-config rescue against divergence and long names Address three review findings on the reinstall config-rescue path: - A complete .rescue-complete marker proves only that staging finished, not that dest_dir was modified. A crash after staging sync but before the rmtree leaves the live kept config intact; if the user edits it before retrying, preferring the staged bytes silently overwrote the newer config. The two copies are indistinguishable in provenance from disk, so detect divergence between a complete staging copy and the live config and abort (preserving both) instead of unconditionally choosing staging. - The staging directory embedded the full extension ID in one path component. Extension IDs are length-unbounded, so a valid long ID could install at dest_dir yet fail every reinstall-after-keep-config with ENAMETOOLONG. Derive the staging component from a fixed-length hash via a new _rescue_staging_dir() helper. - The stranded-config restore used the full config filename as a NamedTemporaryFile prefix; a name already near the component limit plus the random suffix raised ENAMETOOLONG. Use a short fixed prefix. Updates the retry regression test to the new divergence semantics and adds conflict-abort, long-ID, and fixed-prefix coverage. Assisted-by: GitHub Copilot (model: Claude Opus 4.8, autonomous) Co-authored-by: Copilot App <223556219+Copilot@users.noreply.github.com> * Harden preserved-config rescue divergence check and fix test path Assisted-by: GitHub Copilot (model: GPT-5.6, autonomous) * fix: reject/flag symlinked preserved configs on reinstall Assisted-by: GitHub Copilot (model: GPT-5.6-Sol, autonomous) * fix: include symlinks in live-dir config enumeration and address review feedback - _recognized_config_names() now accepts follow_symlinks=False for live dir so symlinked *-config.yml entries are detected and treated as conflicts rather than being silently deleted by rmtree. - Add explanatory comment to bare 'except OSError: pass' in _restore_stranded_config_file's finally block. - Resolve CodeQL dual-import style: use 'from specify_cli import extensions as _ext_module' instead of 'import specify_cli.extensions as _ext_module'. Assisted-by: GitHub Copilot (model: claude-sonnet-4, autonomous) * test: add staging-failure fault-injection test for rescue staging block Add test_staging_failure_aborts_before_dest_dir_removal covering three failure modes (mkdir, os.open/O_CREAT, fsync with EIO) in the rescue staging block. Each parametrized case verifies: - the install aborts before dest_dir is removed - the preserved config bytes remain authoritative - any partial staging is cleaned up and not left as complete - the extension stays unregistered Addresses review feedback on PRRT_kwDOPiFCnc6R351t. Assisted-by: GitHub Copilot (model: claude-sonnet-4.5, autonomous) * test: add test_retry_restores_config_from_staging_when_live_absent Exercises the retry-from-staging branch (if staging_is_complete at line 1505 of extensions/__init__.py) in a scenario where the live config is absent — simulating a power loss that interrupted the rollback before it could write the config back. When the live copy is gone, the live-dir fallback (elif dest_dir.exists()) finds no stranded configs and the packaged default would be kept. Only the staging-complete branch can restore the original bytes and mode. This proves staging (not the fallback) is used on retry. Addresses review feedback on PRRT_kwDOPiFCnc6SAL3L. Assisted-by: GitHub Copilot (model: claude-sonnet-4.5, autonomous) * fix: keep staging files writable; record modes in .rescue-modes.json; fix live-only conflict message Thread 64: Remove os.fchmod/chmod from staged files to avoid Windows read-only attribute that prevents shutil.rmtree from cleaning up. Original permission bits are now written to a .rescue-modes.json sidecar in the staging dir and reloaded during retry, with a fall-back to the staged file's own mode for backwards-compat with pre-sidecar staging dirs. Thread 65: Split the ValidationError message for staging-vs-live conflicts into two accurate cases: files that diverged between both locations ("Both copies have been preserved") and live-only files that have no backup counterpart, which previously incorrectly claimed "Both copies have been preserved" and offered a restore instruction that was impossible. Assisted-by: GitHub Copilot (model: claude-sonnet-4.5, autonomous) * Potential fix for pull request finding 'Empty except' Co-authored-by: Copilot Autofix powered by AI <223894421+github-code-quality[bot]@users.noreply.github.com> * fix: add .keep-config provenance marker to guard rescue path against partially-failed installs When `remove --keep-config` strands config files, write a `.keep-config` marker into the extension directory. `install_from_directory` now only enters the rescue path when that marker is present, preventing a partially- failed install (which also leaves dest_dir with no registry entry but no marker) from having its packaged default configs treated as user-preserved data on a retry from an updated package. Refs: https://github.com/github/spec-kit/pull/3449#discussion_r3606283457 Assisted-by: GitHub Copilot (model: claude-sonnet-4.5, autonomous) * refactor: extract _has_keep_config_marker helper and document empty-content choice Assisted-by: GitHub Copilot (model: claude-sonnet-4.5, autonomous) * fix: defer rescue-backup cleanup until registry commit; validate modes sidecar shape Assisted-by: GitHub Copilot (model: GPT-5.6, autonomous) * fix legacy keep-config rescue and retry baseline handling --------- Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com> Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com> Co-authored-by: Manfred Riem <15701806+mnriem@users.noreply.github.com> Co-authored-by: Copilot Autofix powered by AI <223894421+github-code-quality[bot]@users.noreply.github.com> |
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74662cffad |
feat: update Bob integration to skills-based layout for Bob 2.0 (#3415)
* feat: update Bob integration to skills-based layout for Bob 2.0 Bob 2.0 replaces the command-based workflow (.bob/commands/*.md) with a skills-based layout (.bob/skills/speckit-<name>/SKILL.md), matching the pattern used by Claude Code, Codex, and other skills-first agents. - Switch BobIntegration from MarkdownIntegration to SkillsIntegration - Update folder/dir from .bob/commands to .bob/skills - Change extension from .md to /SKILL.md (skills layout) - Add --skills option (default: True) consistent with Codex pattern - Update tests to inherit from SkillsIntegrationTests (28 tests pass) - Bump catalog entry to version 2.0.0 with updated description Assisted-by: IBM Bob (model: claude-sonnet-4-5, autonomous) * PR comments fix: keep old Bob 1 commands till next release * Copilot suggested change Co-authored-by: Copilot Autofix powered by AI <175728472+Copilot@users.noreply.github.com> * feat(bob): address copilot comments, make skills layout default, demote legacy commands to opt-in * fix(bob): honor legacy_commands in ai_skills persistence and add bob to ALWAYS_SLASH_AGENTS - init.py: suppress ai_skills=True when --legacy-commands is passed so extensions and presets target .bob/commands, not .bob/skills - _invocation_style.py: add 'bob' to ALWAYS_SLASH_AGENTS so init next-steps and hook invocations always show /speckit-<name> (skills is the default layout; no ai_skills flag required) * Copilot suggestion Co-authored-by: Copilot Autofix powered by AI <175728472+Copilot@users.noreply.github.com> * fix(bob): extend IntegrationBase directly to avoid false isinstance(SkillsIntegration) - bob/__init__.py: switch BobIntegration base from SkillsIntegration to IntegrationBase; add _BobSkillsHelper for skills-mode delegation; set invoke_separator='-' explicitly; set _skills_mode flag in setup() so consumers can derive the effective mode without isinstance checks - _helpers.py: replace isinstance(integration, SkillsIntegration) guard with getattr(_skills_mode) so legacy-commands mode does not persist ai_skills=True - _invocation_style.py: remove 'bob' from ALWAYS_SLASH_AGENTS — Bob 2.0 skills are invoked via natural language, not /skill-name slash commands - integrations/catalog.json: advance updated_at to 2026-07-15 * fix(lint): remove unused SkillsIntegration import from _helpers.py * Copilot suggested change Co-authored-by: Copilot Autofix powered by AI <175728472+Copilot@users.noreply.github.com> * feat(bob): add bob skills integration with registrar-based mode detection * address 3 comments from copilot * feat(bob): update registrar config to use legacy commands layout * fix lint * Suggested fix from Copilot Co-authored-by: Copilot Autofix powered by AI <175728472+Copilot@users.noreply.github.com> * fix pr comment * fix pr comment * fix pr comment * refactor(bob): resolve skills mode via base-class hooks + fix command-ref separators Rework the dual-mode handling introduced for Bob 2.0 so an integration's internal representation never leaks into shared init/install/upgrade code, and fix the legacy command-reference separator surfaced in review. Base-class contract: - Add IntegrationBase.is_skills_mode(parsed_options) — the single hook the shared machinery consults to decide whether to persist ai_skills and render skill invocations. SkillsIntegration returns True; Copilot honors --skills / self._skills_mode; Bob returns `not legacy_commands`. - Add IntegrationBase.invoke_separator_for_mode(skills_enabled) — resolves the command-ref separator from a project's persisted mode for registration paths that only have the ai_skills flag (no CLI parsed_options). Default is behavior-preserving; Bob maps skills->"-", legacy->".". - BobIntegration stays on IntegrationBase (mirroring Copilot, the other dual-mode agent) and delegates setup() to internal _BobSkillsHelper / _BobMarkdownHelper. Removes the _skills_mode method and all isinstance(SkillsIntegration) / callable(_skills_mode) probing from _helpers.py and init.py. Fix legacy separator (review feedback): CommandRegistrar.register_commands and PresetManager._resolve_skill_command_refs previously read the single static AGENT_CONFIGS[key]["invoke_separator"], so legacy .bob/commands/ extension and preset command refs rendered /speckit-<cmd> instead of Bob 1.x /speckit.<cmd>. Both now resolve the separator per project mode via invoke_separator_for_mode. Tests: add regression coverage for the is_skills_mode / invoke_separator_for_mode hooks and legacy extension command-ref separators; normalize a width-sensitive workflow assertion to match its siblings. Full suite green. Assisted-by: GitHub Copilot (model: Claude Opus 4.8, autonomous) Co-authored-by: Copilot App <223556219+Copilot@users.noreply.github.com> Copilot-Session: 63f93544-a77f-4f01-bf04-c88806a97dbf * fix(bob,copilot): address review — preserve legacy layout, dual-mode separators, extension-skill token resolution Addresses PR review 4716036212 (3 comments): 1. Bob legacy-install regression: `use`/`switch`/`upgrade` on an existing Bob 1.x project (only `.bob/commands/` on disk, no stored `legacy_commands`) called `is_skills_mode(None)` -> True and rewrote `ai_skills=True`, silently switching extension/command-reference handling to the skills layout. `is_skills_mode` now takes an optional `project_root`; Bob preserves an already-installed legacy layout until an explicit upgrade creates `.bob/skills/`. A fresh project still defaults to skills. 2. Copilot dual-mode separator: `invoke_separator_for_mode` was inherited from the base (mode-independent) and returned Copilot's static `.`, so preset/extension command refs in a Copilot skills project rendered `/speckit.<name>` instead of `/speckit-<name>`. Override it on Copilot to track the persisted `ai_skills` state, consistent with `build_command_invocation` and `effective_invoke_separator`. 3. Bob extension-skill command-ref tokens: verified that merging main's generic `_resolve_command_ref_tokens` (#3544) resolves Bob's tokens via the `CONDITIONAL_SLASH_AGENTS` path (`/speckit-<name>`); added Bob to the command-ref regression parametrize plus dedicated Bob use-path tests. All tests pass (full suite green; merged with current main incl. #3544). Assisted-by: GitHub Copilot (model: Claude Opus 4.8, autonomous) Co-authored-by: Copilot App <223556219+Copilot@users.noreply.github.com> Copilot-Session: 63f93544-a77f-4f01-bf04-c88806a97dbf * fix(bob): resolve command-ref separator with project-aware mode before shared-infra refresh (review #3415) The `use`/`switch` paths refresh shared infrastructure via `_with_integration_setting()` / `_invoke_separator_for_integration()`, which previously resolved the invoke separator through `effective_invoke_separator` / `is_skills_mode` WITHOUT a project_root. For a pre-PR Bob 1.x project (.bob/commands/ on disk, no stored options), this defaulted to the skills "-" separator and rewrote rendered shared-template command refs to /speckit-*, even though ai_skills stayed false. Thread project_root through effective_invoke_separator, the two runtime helpers, and every call site so Bob's on-disk legacy detection governs the separator before shared infra is refreshed. Add a rendered-shared-template regression test covering `use --force`. Assisted-by: GitHub Copilot (model: Claude Opus 4.8, autonomous) Co-authored-by: Copilot App <223556219+Copilot@users.noreply.github.com> Copilot-Session: 63f93544-a77f-4f01-bf04-c88806a97dbf * fix(bob): scope persisted ai_skills flag to active agent when resolving command-ref separator (review #3415) `register_commands` runs once per detected agent, but the persisted `ai_skills` flag describes only the active integration (`opts["ai"]`). When another agent (e.g. Copilot) is active in skills mode while a legacy `.bob/commands` layout is also present, the previous code passed that global `True` to Bob's `invoke_separator_for_mode`, rewriting Bob 1.x command refs to `/speckit-*` instead of `/speckit.*`. Only consult the persisted flag for the agent it describes (`opts["ai"] == agent_name`); otherwise resolve the separator from the agent's own project-aware `effective_invoke_separator(None, project_root)`. Add regression tests covering the mismatched-active-agent case and a control for Bob-active skills mode. Assisted-by: GitHub Copilot (model: Claude Opus 4.8, autonomous) Co-authored-by: Copilot App <223556219+Copilot@users.noreply.github.com> Copilot-Session: 63f93544-a77f-4f01-bf04-c88806a97dbf * fix(bob): detect Spec Kit layout from managed artifacts, not any skills dir (review #3415) Two related mis-detections from review 4723246468: 1. `BobIntegration.is_skills_mode` treated the mere presence of a `.bob/skills/` directory as proof the project is skills-based. A legacy Spec Kit install (managed `.bob/commands/speckit.*.md`) that also carried unrelated Bob 2 skills would be misclassified as skills, so `integration use bob` persisted `ai_skills` and rewrote shared refs. Now the layout is inferred from managed Spec Kit artifacts: legacy/command mode only when managed `speckit.*.md` command files exist and no managed `speckit-*` skill dirs do. 2. The `register_commands` separator for an inactive agent used a disk-based `effective_invoke_separator(None, project_root)` fallback that could pick the skills separator even though the registrar writes the static command layout (`.bob/commands/*.md`). Inactive agents now resolve the separator from the registrar's actual output layout (`extension == "/SKILL.md"`), so command-layout files keep `/speckit.*` refs regardless of sibling dirs. Update the affected hook/E2E tests to use managed artifacts and add regression tests for the mixed-layout and inactive-registrar scenarios. Assisted-by: GitHub Copilot (model: Claude Opus 4.8, autonomous) Co-authored-by: Copilot App <223556219+Copilot@users.noreply.github.com> Copilot-Session: 63f93544-a77f-4f01-bf04-c88806a97dbf * fix(bob): apply managed-artifact detection on upgrade + consistent skill post-processing (review #3415) Two issues from review 4723782860: 1. `BobIntegration.setup()` resolved the layout via `is_skills_mode(parsed_options)` WITHOUT `project_root`, so `integration upgrade bob` on a Bob 1.x install (managed `.bob/commands/speckit.*.md`, no stored options) ignored the existing command files, generated skills, and stale-deleted the legacy commands — silently migrating the project. Pass `project_root` so the same managed-artifact detection used by `use` also governs upgrades. 2. Only `_BobSkillsHelper` overrode `post_process_skill_content` to suppress the shared slash-command hook note. Preset/extension skill generators call that hook on the registered `BobIntegration`, which inherited `IntegrationBase`'s note-injecting default. Repeat the no-op (delegating to the skills helper) on the registered class so every Bob skill-generation path is consistent with intent-activated core Bob skills. Add regression tests for the upgrade-preservation and post-processing paths. Assisted-by: GitHub Copilot (model: Claude Opus 4.8, autonomous) Co-authored-by: Copilot App <223556219+Copilot@users.noreply.github.com> Copilot-Session: 63f93544-a77f-4f01-bf04-c88806a97dbf * feat(bob): add --skills migration opt-in; fix separator + manifest loss (review #3415) Address review #3415 (4724160183): - Comment 1: Add an explicit `--skills` opt-in to BobIntegration. It forces the skills layout over on-disk auto-detection, giving legacy Bob 1.x installs a supported migration path (`integration upgrade bob --integration-options="--skills"`). `--skills` and `--legacy-commands` are mutually exclusive (clean exit-1 error). - Comment 2: In CommandRegistrar.register_commands, derive the command-ref separator from the output layout (agent_config["extension"]) for the active agent too, not the persisted ai_skills flag. A command-layout file (.bob/commands/*.md, .github/agents/*.agent.md) always renders /speckit.*; only a /SKILL.md scaffold uses /speckit-*. Dual-layout agents (Bob, Copilot) write skills via their own setup()/skills path, so register_commands only ever emits their command-layout files. - Comment 3: Update docs/reference/integrations.md Bob entry to document the skills-based default (.bob/skills/), the deprecated --legacy-commands opt-out, and the --skills migration path. Also fix a latent manifest-loss bug surfaced by the migration path: the upgrade Phase 2 stale-file cleanup built a throwaway manifest sharing the integration key and called uninstall(), which always deleted {key}.manifest.json. Any layout-shrinking upgrade (e.g. legacy->skills) thus wiped the freshly-saved manifest, leaving the project untracked and un-upgradeable. uninstall() now takes remove_manifest (default True); the stale-cleanup pass passes False. Adds regression tests for the --skills opt-in, mutual exclusion, corrected active-agent separator, remove_manifest=False, and an end-to-end legacy->skills migration that verifies the manifest survives and the project remains upgradeable. Full suite: 4555 passed, 5 skipped. Assisted-by: GitHub Copilot (model: Claude Opus 4.8, autonomous) Co-authored-by: Copilot App <223556219+Copilot@users.noreply.github.com> Copilot-Session: 63f93544-a77f-4f01-bf04-c88806a97dbf * docs(agents): align token-resolution comment with output-layout separator rule (review #3415) Address review #3415 (4725516805). The comment above resolve_command_refs still described the removed state-based behavior ("resolve it from the integration using the project's persisted skills state"). Update it to describe the output-layout rule that register_commands now uses: _sep is derived from the layout this registrar writes (a /SKILL.md scaffold uses the skills separator; a command-layout file uses the command separator), not the persisted ai_skills state. Comment-only change; no behavior change. Assisted-by: GitHub Copilot (model: Claude Opus 4.8, autonomous) Co-authored-by: Copilot App <223556219+Copilot@users.noreply.github.com> Copilot-Session: 63f93544-a77f-4f01-bf04-c88806a97dbf * fix(bob): reconcile extension artifacts on layout change (review #3415) When a dual-mode agent (Bob) flips between the legacy commands layout and the skills layout during `integration upgrade` (via `--skills` / `--legacy-commands`), the old layout's extension command/skill files were left orphaned: Phase 2 stale cleanup only removes files tracked by the *integration* manifest, while extension artifacts are tracked in the extension registry. Detect the layout flip by comparing whether the old vs new manifest tracks a `/SKILL.md` scaffold, and when it changed, unregister the agent's extension artifacts before the existing re-registration so they are recreated in the new layout (and the per-agent registry is updated). Preset artifacts are documented as a known, pre-existing cross-cutting gap: no agent-scoped preset re-registration exists in use/switch/upgrade for any agent, so reconciling them is out of scope for this Bob migration. Assisted-by: GitHub Copilot (model: Claude Opus 4.8, autonomous) Co-authored-by: Copilot App <223556219+Copilot@users.noreply.github.com> Copilot-Session: 63f93544-a77f-4f01-bf04-c88806a97dbf * fix(bob): reject layout migration when preset overrides are installed (review #3415) A command↔skills layout change during `integration upgrade` cannot reconcile preset artifacts: presets track their command/skill files in per-preset `registered_commands`/`registered_skills` metadata, and there is no agent-scoped preset re-registration anywhere in the CLI. Migrating would delete a preset's old-layout files without recreating them in the new layout and leave the preset registry claiming artifacts that no longer exist. Detect the intended layout via `is_skills_mode` (so a plain same-layout upgrade is unaffected) and, when it flips while preset overrides are installed for the agent, reject the upgrade *before any mutation* with an actionable error pointing at the remove → upgrade → reinstall workaround. Extension artifacts are still reconciled for the safe (no-preset) case. Adds a regression test and documents the migration caveat in the Bob integration reference entry. Assisted-by: GitHub Copilot (model: Claude Opus 4.8, autonomous) Co-authored-by: Copilot App <223556219+Copilot@users.noreply.github.com> Copilot-Session: 63f93544-a77f-4f01-bf04-c88806a97dbf * fix(bob): restrict layout reconciliation to the active integration (review #3415) `integration_upgrade` supports upgrading a secondary (non-active) integration, but the layout-change extension reconciliation was unsafe there. `ExtensionManager.unregister_agent_artifacts()` treats the unscoped per-extension `registered_skills` list as belonging to the passed agent and, when that agent's skills directory is absent, falls back to scanning every agent's skills directory — so reconciling a secondary Bob layout flip could delete or untrack the *active* agent's extension skills. The subsequent re-registration cannot repair that because extension skill rendering is intentionally scoped to the active agent (#2948). Gate the unregister-before-register reconciliation on `installed_key == key` so it only runs for the active integration. Secondary agents only ever have extension command files (skills are active-agent-only), which the existing re-registration rewrites in place, so skipping the unregister orphans nothing new. Adds a regression test asserting a secondary Bob layout change leaves the active agent's extension skill intact on disk and in the registry. Assisted-by: GitHub Copilot (model: Claude Opus 4.8, autonomous) Co-authored-by: Copilot App <223556219+Copilot@users.noreply.github.com> Copilot-Session: 63f93544-a77f-4f01-bf04-c88806a97dbf * fix(bob): fail closed when preset registry is unreadable (review #3415) Address review 4744636079: - _migrate_commands: the preset guard previously failed *open* — a registry read/parse error returned an empty "no presets" list, so a --force layout-changing upgrade could delete preset-overridden command files while their registry state was unknown. Read the registry file directly and raise _PresetRegistryUnreadableError on any read/parse failure or malformed structure, rejecting the migration before any mutation. A genuinely absent registry still returns [] (safe). - bob: correct the is_skills_mode docstring — upgrade *does* run setup(); disk detection is needed because legacy Bob 1.x installs never persisted a legacy_commands option, so the stored mode is unavailable. - tests: add fail-closed E2E (corrupted registry rejected, valid-empty allowed) plus a unit test for _installed_presets_affecting_agent covering absent / corrupted / malformed / valid / affecting-agent cases. Assisted-by: GitHub Copilot (model: Claude Opus 4.8, autonomous) Co-authored-by: Copilot App <223556219+Copilot@users.noreply.github.com> Copilot-Session: 63f93544-a77f-4f01-bf04-c88806a97dbf * fix(bob): fail closed on malformed preset entries too (review #3415) Address review 4745191015: the preset guard read a parseable registry but silently skipped malformed per-preset metadata and treated a malformed registered_commands value as "no matching artifacts". A registry such as {"presets":{"p1":[]}} therefore allowed a layout migration even though p1's ownership is unknown, risking deletion of preset-managed files. Now raise _PresetRegistryUnreadableError for a non-dict preset entry, a non-dict registered_commands, or a non-list registered_skills. Extend the unit test to cover these malformed shapes. Assisted-by: GitHub Copilot (model: Claude Opus 4.8, autonomous) Co-authored-by: Copilot App <223556219+Copilot@users.noreply.github.com> Copilot-Session: 63f93544-a77f-4f01-bf04-c88806a97dbf --------- Co-authored-by: Copilot Autofix powered by AI <175728472+Copilot@users.noreply.github.com> Co-authored-by: Manfred Riem <15701806+mnriem@users.noreply.github.com> Co-authored-by: Copilot App <223556219+Copilot@users.noreply.github.com> |
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d6fa0460ed |
feat(workflows): WorkflowResolver standalone (PR 1) (#3557)
* feat(workflows): add standalone WorkflowResolver and overlay subsystem Implement PR 1 of the workflow-overlays plan: a concrete, standalone WorkflowResolver for downstream workflow extensibility without touching the Preset subsystem. - Add overlay manifest schema (Overlay, OverlayEdit, validate_overlay_yaml) - Add pure-function merge engine (find_step, apply_edit, merge_steps, validate_edits) with recursive anchor search and higher-wins semantics - Add StepListComposer and tiered layer sources (project, installed, base) - Add WorkflowResolver facade with inline HIGHER_WINS priority sorting - Add CLI verbs: workflow overlay add/set-priority/enable/disable/remove/list and workflow resolve <id> - Wire WorkflowEngine.load_workflow through WorkflowResolver - Extend workflow add to copy optional overlays/ subdirectory from local workflow directories - Add comprehensive unit, integration, and security tests Refs: discussion #3473 (https://github.com/github/spec-kit/discussions/3473) Assisted-by: Kimi (model: opencode-go/kimi-k2.7-code, autonomous) * fix(workflows): reject symlinked overlay directories in layer sources Address PR #3557 review comments r3594064534 and r3594064563: - ProjectOverlaySource.collect now rejects symlinked per-workflow overlay directories (.specify/workflows/overlays/<id>) before iterating - InstalledOverlaySource.collect now rejects symlinked installed overlay directories (.specify/workflows/<id>/overlays) before iterating - workflow_overlay_list catches ValueError from resolver and exits with code 1 instead of crashing on unhandled exceptions - Added .specify/workflows/overlays to _reject_unsafe_workflow_storage chokepoint for defense-in-depth These guards prevent symlinked overlay directories from redirecting auto-loaded overlay YAML to attacker-controlled content outside the project, which could inject executable shell steps into trusted workflows. Refs: PR #3557 review comments r3594064534, r3594064563 Assisted-by: opencode-go/qwen3.7-max (autonomous) * fix(workflows): address Copilot review findings in merge engine - Apply inserts before winning replace to prevent anchor-not-found errors when replace changes step ID (r3594064604) - Track attribution recursively for nested steps in composite inserts/replaces so workflow resolve attributes all child steps correctly (r3594064638) - Add regression tests for both fixes Refs: PR #3557 review discussion Assisted-by: GitHub Copilot (model: qwen3.7-plus, autonomous) * refactor(workflows): simplify overlay architecture to 2-tier Remove installed overlays tier to enforce clean separation of concerns: - workflow add installs workflows only (no overlay copying) - workflow overlay add installs overlays only (project-local) Changes: - Remove InstalledOverlaySource class and all references - Remove overlay-copying logic from _validate_and_install_local() - Update WorkflowResolver to 2-tier: project overlays + base workflow - Fix --priority override timing: apply before validation, not after - Remove tests for installed overlays (no longer applicable) Rationale: If upstream controls both base workflow and shipped overlays, and both get overwritten on bundle update, there's no reason to ship overlays separately. Overlays only make sense when someone other than the base author adds them. Resolves all three review findings from PR #3557: - r3594064677: workflow add no longer copies overlays from all call sites - r3594064705: --priority override now applied before validation - r3594064726: no stale installed overlays (tier removed entirely) Assisted-by: Claude (model: claude-opus-4-7, autonomous) * fix(workflows): harden overlay symlink handling Assisted-by: GitHub Copilot (model: GPT-5.4, autonomous) Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * docs(workflows): remove stale installed-overlay references from workflows.md The 2-tier refactor ( |
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8a5bcc21a5 |
fix(extensions,presets): surface clean error on malformed download URL (#3577)
* fix(extensions,presets): surface clean error on malformed download URL `ExtensionCatalog.download_extension` and `PresetCatalog.download_pack` read `download_url` from catalog payload data and pass it to `urlparse(...).hostname` during the HTTPS validation. A malformed authority (e.g. an unterminated IPv6 bracket like `https://[::1`) makes urlparse/hostname raise a raw `ValueError`, which escapes past the command handlers — they only catch `ExtensionError` / `PresetError` — and surfaces as an uncaught traceback. Guard the parse in a try/except and re-raise as the domain error so the CLI reports a clean "download URL is malformed" message. Mirrors the same fix in catalogs (#3435) and workflows/catalog.py (#3484). Adds regression coverage for both catalogs. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * fix(presets): escape markup in preset_add error handlers Copilot review on #3577 flagged that the malformed-URL fix stopped short: `download_pack` now raises a clean `PresetError`, but the `preset_add` handler rendered `{e}` unescaped. A catalog `download_url` like `https://[not-an-ip]/x` is embedded verbatim in the message, so Rich interprets `[not-an-ip]` as a markup tag and can raise a style/markup exception while rendering the error — the CLI still crashes instead of exiting cleanly. Escape `str(e)` in the preset command handlers, matching the extension handler at `extensions/_commands.py:657`, and hoist the `rich.markup` import to module scope (dropping the two inline imports). Adds CLI-level regression tests: a bracketed-host `download_url` exits cleanly, and the compatibility/validation/error handlers escape markup-bearing messages. Both tests fail on the pre-fix handler (test-the-test verified). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com> |
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6d77b4a099 |
fix(integrations): catch OverflowError on a priority: .inf in add/remove (#3589)
IntegrationCatalog.add_catalog and remove_catalog re-validate the
existing catalog entries' priorities inline, separately from the base
loader. Both did `int(raw_priority)` under `except (TypeError,
ValueError)`, so a `priority: .inf` (float('inf')) raised OverflowError:
add_catalog leaked a raw traceback instead of IntegrationValidationError,
and remove_catalog crashed while building the display order.
Add OverflowError to both handlers, matching the base loader (#3525) and
the workflow/step loaders (#3526). add_catalog now raises
IntegrationValidationError; remove_catalog falls back to positional order
like the other non-integer priorities.
Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>
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57cc518d63 |
fix(workflows): reject bool / .inf catalog priority in workflow & step catalog loaders (#3526)
* fix(workflows): reject bool/.inf catalog priority in workflow & step catalog loaders
The WorkflowRegistry and StepRegistry catalog-config loaders coerced priority
with int() inside except (TypeError, ValueError), missing two guards the base
CatalogStackBase loader already has:
- bool is an int subclass, so 'priority: true' was silently coerced to 1;
- int(float('inf')) raises OverflowError (not caught), so 'priority: .inf'
crashed with an uncaught traceback.
Add the explicit bool check and OverflowError to both loaders, and add
OverflowError to the two _coerce_priority helpers used by 'catalog add' (they
return 0 on an uncoercible existing priority instead of crashing).
Parametrized tests on both TestWorkflowCatalog and TestStepCatalog reject
priority true/false/.inf (fail before: bool coerced to 1 / inf OverflowError).
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
* test(workflows): cover add_catalog() OverflowError fallback for existing priority: .inf
The workflow/step catalog priority guards added OverflowError to _coerce_priority
(the 'catalog add' fallback), but the tests only exercised get_active_catalogs().
Add tests that prewrite an existing 'priority: .inf' entry and call add_catalog()
for both WorkflowCatalog and StepCatalog, asserting the command succeeds and the
new entry gets a valid priority (inf coerced to 0, +1). Fails before: int(inf)
OverflowError crashed add_catalog.
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
---------
Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
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eb2252a1cb |
fix(catalogs): 'priority: .inf' yields a clean validation error instead of crashing (#3525)
* fix(catalogs): priority: .inf yields a clean validation error, not OverflowError
_load_catalog_config coerces a catalog entry's priority with int() inside
except (TypeError, ValueError). int(float('inf')) raises OverflowError, which is
not in that tuple, so a YAML 'priority: .inf' escaped as an uncaught traceback
instead of the intended 'expected integer' validation error (the bool-is-int
case is already guarded just above). Add OverflowError to the except tuple.
Test mirrors the existing rejects_boolean_priority test with priority: .inf
(fails before: OverflowError; passes after: ValidationError naming the config).
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
* fix(presets): priority: .inf in a preset catalog config yields a clean error
The PresetCatalog._load_catalog_config priority parser has its own loader
(separate from CatalogStackBase) that caught only TypeError/ValueError, so a
YAML 'priority: .inf' escaped as an uncaught OverflowError from int(float('inf')).
Add OverflowError to the except tuple (the bool-is-int case is already guarded
just above), matching catalogs.py.
Test mirrors rejects_boolean_priority with priority: .inf (fails before:
OverflowError; passes after: PresetValidationError).
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
---------
Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
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3d2901eb75 |
fix(workflows): fail fan-in loudly on a non-string wait_for entry (#3579)
`FanInStep.execute` already guards a non-list `wait_for` (#3482), and the engine's load-time validation rejects non-string entries. But the engine does not auto-validate step config, so on an unvalidated run `execute` iterated the list's *elements* raw: - An unhashable entry (a list/dict from a YAML indentation slip like `wait_for: [[a, b]]`) crashed the whole run at `context.steps.get(entry, ...)` with a raw `TypeError: cannot use 'list' as a dict key`. - A hashable-but-non-string entry (`wait_for: [123]`) silently joined an empty `{}` and still reported COMPLETED — the exact "silent empty result + COMPLETED" wiring bug the whole-list guard and the engine's fan-in validation both exist to prevent. Extend the execute() guard to reject any non-string entry with the engine's "entries must be step-id strings" phrasing, mirroring the sibling non-list guard right above it. Adds regression coverage for unhashable and hashable-non-string entries. Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com> |
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c1e5cfa0aa |
fix(workflows): fail fan-out loudly on a truthy non-mapping step template (#3537)
* fix(workflows): fail fan-out loudly on a truthy non-mapping step template
A fan-out step whose `step:` is a truthy scalar or list (an authoring mistake) passed execute and reached the engine, which calls template.get("id", ...) in _run_fan_out — raising AttributeError and taking down the whole run. validate already rejects a non-mapping step, but the engine does not auto-validate, so an unvalidated run crashed.
Guard execute to FAIL the step (with a clear error and normalized empty output) instead, mirroring the existing non-list items guard and the switch non-dict cases guard. Add the matching test_execute_non_dict_step_fails_loudly covering the execute-path guard (validate was already covered).
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
* fix(workflows): reject explicit fan-out `step: null` in validate()
The runtime guard in execute() rejects a truthy non-mapping step, but
`config.get("step", {})` only substitutes the `{}` default for an *absent*
key — an explicit `step: null` reaches the guard as None and FAILS the step.
validate() previously exempted None (`step is not None and ...`), so such a
workflow passed validation and then failed during execution.
Align validate() with the runtime guard: a present-but-non-mapping `step`
(including `None`) is an authoring mistake and is now rejected up front.
Extend the validate and execute regression cases to cover None.
Addresses Copilot review feedback on #3537.
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
---------
Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
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b139bd0393 |
fix(workflows): reject a non-string prompt in prompt-step validate() (#3582)
`PromptStep.execute` str()-coerces `config['prompt']` and dispatches the
result to the integration CLI as the model's instructions. But its `validate`
only checked that `prompt` was *present*, not that it was a string — the exact
parity gap the sibling `ShellStep` closes for `run`.
So a YAML authoring slip like `prompt: [review, this]` or `prompt:` (null)
passed validation, then `execute` sent the Python repr (`"['review', 'this']"`,
`"None"`) to the LLM verbatim — silently wrong instructions with no error and a
COMPLETED status. The engine does not auto-validate step config
(`load_workflow` explicitly defers validation), so validation is the only place
this surfaces before dispatch.
Extend `validate` to reject any non-string `prompt` with the shell-step's
phrasing ("'prompt' must be a string, got <type>"), mirroring the shell `run`
and command `input`/`options` type checks. A `{{ ... }}` expression is still a
str, so it stays valid. Adds regression coverage for non-string prompts
(null/list/int/dict) and confirms an expression prompt still validates.
Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
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f75f5f836b |
fix(workflows): route 'workflow status --json' errors to stderr (#3520)
* fix(workflows): route 'workflow status --json' errors to stderr The workflow_status run_id error paths (FileNotFoundError -> 'Run not found', ValueError -> invalid run) used the stdout console and fired before the json_output branch, so 'specify workflow status <bad-id> --json' wrote a Rich-rendered error to stdout and corrupted the JSON stream a consumer would json.loads(). Route both through _error_console(json_output) so they go to stderr under --json, matching the sibling 'workflow run'/'workflow resume' commands (which use the identical RunState.load try/except) and the documented stdout-purity contract. Test asserts the not-found error appears on stderr and stdout stays empty under --json (fails before: the error was on stdout). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * test(workflows): cover the ValueError handler in workflow status --json purity The stderr-routing fix reroutes both the FileNotFoundError and ValueError run_id handlers, but the test only exercised FileNotFoundError — a regression of the ValueError path back to stdout would have gone uncaught. Add a ValueError case (RunState.load raising) asserting the same stderr-only / empty-stdout behavior. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com> |
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c864fc7447 |
fix(integrations): Forge dispatches hyphenated /speckit-<cmd> invocations (#3529)
Forge installs its slash-commands with hyphenated names (speckit-foo-bar, via format_forge_command_name and the injected frontmatter name), but ForgeIntegration inherited MarkdownIntegration.build_command_invocation, which builds the dotted /speckit.<cmd>. So 'workflow'/command dispatch invoked /speckit.plan while the registered command is /speckit-plan — a name Forge never registered. Override build_command_invocation to reuse format_forge_command_name, producing /speckit-<name> (with '.'-to-'-' for extension commands), mirroring the skills agents' hyphenated invocation. Tests assert Forge core + extension invocations are hyphenated, incl. args (fail before: dotted /speckit.plan / /speckit.git.commit). Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com> |
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41c5dfc3a1 |
fix(auth): Azure DevOps az-CLI token acquisition returns None on undecodable output (#3527)
_acquire_via_az_cli runs 'az account get-access-token' with text=True, so subprocess.run decodes stdout with the locale encoding and raises UnicodeDecodeError (a ValueError sibling, NOT a JSONDecodeError) when the output can't be decoded. That escaped the except (OSError, TimeoutExpired, JSONDecodeError, KeyError) tuple and crashed a helper whose contract is to return str | None. Add UnicodeDecodeError to the tuple. Test patches subprocess.run to raise UnicodeDecodeError and asserts resolve_token returns None (fails before: the error propagated). Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com> |
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0d780162f9 |
fix(bundle): surface a clean BundlerError on a malformed bundle download URL (#3586)
`_download_manifest` and its `_require_https` helper parsed the catalog entry's `download_url` with an unguarded `urlparse(url)`. A malformed authority — e.g. an unclosed IPv6 bracket like `https://[::1` — makes `urlparse` (or `.hostname` on older Pythons) raise a raw `ValueError`. The three `bundle` CLI commands (`info`, `install`, `update`) only catch `BundlerError`, so that `ValueError` escaped as an uncaught traceback. Wrap both parse sites in the same `try/except ValueError -> BundlerError` guard already used by the sibling `_validate_remote_url` (and established by the merged catalog-URL fix #3576), so a bad `download_url` reports a clean, actionable error in every mode. Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com> |
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0a60e53e06 |
fix(presets): raise PresetValidationError, not raw ValueError, on malformed catalog URL (#3576)
`PresetCatalog._validate_catalog_url` called `urlparse(url).hostname` without guarding it. For a malformed authority such as an unterminated IPv6 bracket (`https://[::1`), `urlparse(...).hostname` raises `ValueError: Invalid IPv6 URL`, which escapes the method. Its docstring promises `PresetValidationError`, and its callers (`preset catalog add`, `preset catalog list` reading the `SPECKIT_PRESET_CATALOG_URL` env var / `.specify/preset-catalogs.yml`) only catch `PresetValidationError` -- so a malformed URL crashes the CLI with a traceback instead of a clean error message. The shared `CatalogStackBase` (#3435), `workflows` (#3484), `bundler` (#3433) and `IntegrationCatalog` copies already wrap this in `try/except ValueError`; the preset validator was the remaining un-updated twin. Mirror the shared implementation: wrap `urlparse` + `.hostname`, re-raise as `PresetValidationError("Catalog URL is malformed: ...")`, and read the local `hostname` in the host check. Add a regression test mirroring `IntegrationCatalog`'s `test_malformed_url_rejected_cleanly`; it is red before the fix (raw `ValueError`) and green after. Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com> |
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4fed84a08d |
fix(extensions): resolve __SPECKIT_COMMAND tokens in auto-registered skills (#3544)
* fix(extensions): resolve command ref tokens in extension skills * fix(extensions): render skill command refs by invocation style Resolve extension skill command-reference tokens with the active skill invocation style so Codex and ZCode use $speckit-* while slash-style agents keep their native forms. Preserve literal command-looking text. * fix(extensions): resolve slash skill command refs from init options --------- Co-authored-by: root <kinsonnee@gmail.com> |
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459f483f57 |
fix(workflows): fail if/switch steps on non-list branch instead of crashing (#3515)
* fix(workflows): fail if/switch steps on non-list branch instead of crashing `IfThenStep.validate()` and `SwitchStep.validate()` already reject a non-list branch (`then`/`else`, and `case`/`default`), but the engine's `execute()` path does not auto-validate (see `WorkflowEngine.load_workflow`, whose docstring notes the definition is "not yet validated"). On an unvalidated run, the selected branch is fed straight into `next_steps`, which `_execute_steps` iterates as step mappings. A non-list branch — a single mapping or scalar authoring mistake — was iterated element-wise (a dict yields its string keys, a str its characters) and raised `AttributeError` on `.get()`, taking down the whole run; the engine invokes `step_impl.execute()` with no surrounding try/except. Guard both `execute` paths to return a FAILED StepResult naming the type error instead, mirroring the switch non-mapping `cases` and fan-out non-list `items` handling. The switch guard is factored into a shared `_non_list_branch_failure` helper covering both `case` and `default` branches. A missing `else`/`default` still defaults to an empty list (COMPLETED), unchanged; the guard fires only on an explicit non-list value. The condition/expression is still evaluated first, so its result is surfaced in the step output for downstream context. Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Potential fix for pull request finding Co-authored-by: Copilot Autofix powered by AI <175728472+Copilot@users.noreply.github.com> * Potential fix for pull request finding Co-authored-by: Copilot Autofix powered by AI <175728472+Copilot@users.noreply.github.com> * Potential fix for pull request finding Co-authored-by: Copilot Autofix powered by AI <175728472+Copilot@users.noreply.github.com> * test(workflows): cover switch non-list branch execute paths Copilot flagged the new switch branch guards as untested: coverage stopped at a non-mapping `cases` container. Add SwitchStep.execute tests for a matched case with a non-list body and a non-list default (dict/str/int), asserting FAILED, the branch-specific error, empty next_steps, and preserved expression_value. Also add explicit `default: null` / `else: null` normalization tests so the validator-approved empty-branch contract cannot regress. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com> Co-authored-by: Copilot Autofix powered by AI <175728472+Copilot@users.noreply.github.com> |
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fd101d531e |
feat(integrations): add Grok Build skills-based integration (#3535)
* feat(integrations): add Grok Build skills-based integration Add first-class support for xAI Grok Build via SkillsIntegration, installing speckit skills under .grok/skills and wiring init/invocation/catalog surfaces. Assisted-by: Grok Build (model: grok-4, supervised) * test+docs: address Copilot review on Grok multi-install and next steps Assert init next-steps guidance for Grok (.grok/skills, /speckit-*) and clarify that multi-install safety is path/manifest isolation, not agent-context defaults such as shared AGENTS.md. * fix(integrations): Grok headless --always-approve and isolation paths Document Grok multi-install isolation as .grok/skills and .grok/rules. Override build_exec_args to pass --always-approve so non-interactive dispatch is not blocked at tool permission gates. * docs(integrations): list only managed .grok/skills for Grok isolation Multi-install isolation documents Spec Kit-managed paths; Grok only writes .grok/skills, so drop the read-only .grok/rules entry. * fix(integrations): always-slash Grok hooks and refresh catalog date Move grok to ALWAYS_SLASH_AGENTS so hooks never emit /speckit.plan when ai_skills is missing/false. Update slash-format tests, persist ai_skills on init, and bump catalog updated_at for the Grok entry. --------- Co-authored-by: Nate Chadwick <1232206+natechadwick@users.noreply.github.com> Co-authored-by: test <test@example.com> |
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2fb18c73cb |
fix(integration): preserve ai_skills on use for skills-mode Copilot (#3550) (#3551)
`specify integration use copilot` against a Copilot install configured with `--integration-options "--skills"` dropped `"ai_skills": true` from init-options.json and regenerated extension commands in the legacy `.agent.md`/`.prompt.md` layout, contradicting `integration.json`'s stored `parsed_options.skills: true`. `_update_init_options_for_integration` only inspected `SkillsIntegration` / the instance `_skills_mode` flag. On the `use` path no `setup()` runs, so the freshly-resolved Copilot instance has `_skills_mode == False` and the stored skills intent in `parsed_options` was ignored. Thread the resolved `parsed_options` through and treat `parsed_options["skills"]` as skills mode. Adds a regression test that resets the registry singleton's `_skills_mode` to simulate a fresh process (in-process singleton reuse otherwise masks the bug). Assisted-by: GitHub Copilot (model: Claude Opus 4.8, autonomous) Copilot-Session: 06fb6ae9-f444-4dfd-ab3f-d0669c5d0604 Co-authored-by: Copilot App <223556219+Copilot@users.noreply.github.com> |
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c1722a425e |
fix(workflows): raise a clear error, not a cryptic crash, on non-string filter args (#3522)
The `map`, `join`, and `contains` expression filters assumed their
argument was a string. A non-string argument — an authoring mistake such
as `| map(5)`, `| join(5)`, or `| contains(5)` — reached an operation
that only strings support and raised a cryptic exception that escaped the
evaluator entirely:
* `map(5)` -> `attr.split(".")` -> AttributeError
* `join(5)` -> `separator.join(...)` -> AttributeError
* `contains(5)` on a string value -> `x in str` -> TypeError
The engine wraps neither expression evaluation nor `step_impl.execute()`
in a try/except, so each of these took down the whole run with a message
that names none of the real problem.
Validate the argument type up front and raise a `ValueError` naming the
filter and the offending type instead, mirroring the strict argument
handling already in `from_json`. `contains` guards only the string-value
branch: for a list value, membership of any element type is legitimate
(`5 in [1, 2, 5]`), so that branch is intentionally left unguarded.
Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
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6688b447b7 |
feat(workflows): expose workflow source directory to steps (#3469)
* feat(workflows): expose workflow source directory to steps (#3467) Propagate WorkflowDefinition.source_path to steps via {{ context.workflow_dir }} in template expressions and SPECKIT_WORKFLOW_DIR env var for shell steps. The original source directory is persisted in state.json so resume restores the correct value instead of the run-directory copy path. Closes #3467 Assisted-By: 🤖 Claude Code * fix: apply bot review suggestions (#2) Applied fixes from bot review comments: - Comment #3563319058: prevent stale SPECKIT_WORKFLOW_DIR leak from parent env - Comment #3563319094: use cross-platform Python one-liner instead of printenv - Comment #3563319103: add monkeypatch.delenv for deterministic env var test - Comment #3563319116: same env leak fix as #3563319058 Assisted-By: 🤖 Claude Code * fix: use YAML single-quotes and forward-slash paths for Windows CI (#2) sys.executable on Windows returns backslash paths (D:\a\...) which YAML double-quoted strings interpret as escape sequences. Switch to single-quoted YAML strings and normalize paths with replace("\\", "/"). Assisted-By: 🤖 Claude Code * fix: resolve workflow_dir to absolute path and add installed-by-ID test (#3469) Applied fixes from bot review comments: - Comment #3563382853: resolve source_path before taking parent to ensure absolute paths - Comment #3563382864: add test for installed-by-ID workflow_dir semantics Assisted-By: 🤖 Claude Code * docs: document context.workflow_dir and SPECKIT_WORKFLOW_DIR Add reference documentation for the new workflow_dir runtime value in both workflows/README.md and docs/reference/workflows.md so workflow authors can discover the feature and its semantics. Assisted-By: 🤖 Claude Code * fix: clarify installed workflow_dir is an absolute path (#3469) The documentation for context.workflow_dir described the installed-by-ID case as ".specify/workflows/<id>/" which appears relative, contradicting the "resolved absolute path" semantics. Clarified that it is the absolute path to the installation directory. Assisted-By: 🤖 Claude Code * fix: apply bot review suggestions (#3469) Applied fixes from bot review comments: - Comment #3580005128: Quote sys.executable in shell step env var test - Comment #3580005174: Quote sys.executable in no-env-var test Assisted-By: 🤖 Claude Code * fix: apply bot review suggestions (#3469) Applied fixes from bot review comments: - Comment #3587146944: Quote interpolated workflow_dir path in example Assisted-By: 🤖 Claude Code |
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fb076a38b8 |
fix(workflows): fan-out max_concurrency .inf falls back to sequential, not crash (#3521)
_run_fan_out coerces max_concurrency with int() inside except (TypeError,
ValueError). int(float('inf')) raises OverflowError, which is not in that tuple,
so a YAML 'max_concurrency: .inf' crashed the whole run with an uncaught
OverflowError instead of the documented 'cannot be coerced -> sequential'
fallback. Add OverflowError to the except tuple (nan already coerced via
ValueError).
Extends the existing invalid-value parametrization with float('inf')/nan (fails
before on inf: OverflowError; passes after: sequential, all items in order).
Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
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353851e966 |
fix(presets): seed constitution from preset constitution-template (#3272) (#3276)
* fix(presets): seed constitution from preset constitution-template (#3272) The constitution is the only template materialized to a live file (.specify/memory/constitution.md) rather than resolved on demand, yet ensure_constitution_from_template hardcoded a copy from the core template and ignored PresetResolver. Combined with init seeding the constitution before preset installation, a preset's constitution-template (e.g. strategy: replace with a ratified constitution) could never go live. Changes: - ensure_constitution_from_template now resolves constitution-template through PresetResolver, so a preset/override/extension wins and core is the fallback. - init seeds the constitution after preset installation so init --preset uses the resolved stack. - install_from_directory re-seeds memory/constitution.md from the resolved preset template, guarded to only act when the memory file is missing or still contains generic placeholder tokens — authored constitutions are never overwritten. Covers preset add and install_from_zip. - Tests for preset seeding, placeholder re-seed, authored-constitution preservation, override resolution, and resolver-aware init seeding. Assisted-by: GitHub Copilot (model: Claude Opus 4.8, autonomous) Co-authored-by: Copilot App <223556219+Copilot@users.noreply.github.com> * fix(presets): compose constitution-template when seeding memory Take on review feedback from Copilot and gglachant: - constitution seeding previously copied the top layer file path verbatim even when the winning layer used a composing strategy (prepend/append/wrap), which could leave {CORE_TEMPLATE} unresolved. - both seeding paths now inspect resolver layers and only copy verbatim for replace; non-replace strategies materialize composed content via PresetResolver.resolve_content(). - add regression tests for wrap strategy composition in both PresetManager seeding and ensure_constitution_from_template. - add a drift-guard test pinning _CONSTITUTION_PLACEHOLDER_TOKENS to the placeholders in templates/constitution-template.md. Assisted-by: GitHub Copilot (model: GPT-5.3-Codex, autonomous) Co-authored-by: Copilot App <223556219+Copilot@users.noreply.github.com> * refactor(presets): unify constitution template materialization Address latest Copilot feedback on the constitution seeding path: - moved resolver/layer I/O behind the existing-memory fast path in init - corrected tracker output for composed materialization - deduplicated materialization logic shared by init and preset install seeding into presets._materialize_constitution_template() Behavior is unchanged for replace strategies (copy verbatim) and remains composed for prepend/append/wrap via resolve_content(). Assisted-by: GitHub Copilot (model: GPT-5.3-Codex, autonomous) Co-authored-by: Copilot App <223556219+Copilot@users.noreply.github.com> * fix(init): restore shutil import The constitution materialization refactor removed the module import, but init still uses shutil.rmtree when cleaning up a failed new-project initialization. Restore the import so the required ruff check passes. Assisted-by: GitHub Copilot (model: GPT-5.6 Sol, autonomous) Co-authored-by: Copilot App <223556219+Copilot@users.noreply.github.com> * fix(presets): harden constitution materialization Address the outstanding review batch for preset constitution seeding: - use checked atomic writes and reject symlinked memory paths - replace placeholder heuristics with hash/source provenance - rematerialize unchanged generated constitutions by resolver priority - preserve authored or edited constitutions, including placeholder mentions - warn non-fatally when post-install materialization cannot complete - retain exact core-template comparison for legacy projects without provenance Add focused provenance, priority, symlink, and failure-path coverage, and update integration inventories for the generated provenance sidecar. Assisted-by: GitHub Copilot (model: GPT-5.6 Sol, autonomous) Co-authored-by: Copilot App <223556219+Copilot@users.noreply.github.com> Copilot-Session: 1b2c095d-b45c-4d52-8d56-bd6121d96ab6 * fix(presets): reconcile constitution after removal When the removed preset supplied constitution-template, rematerialize the winning remaining resolver layer only if provenance proves the live file is still generated and unchanged. Preserve edited constitutions and report post-removal reconciliation failures as non-fatal warnings. Add coverage for restoring the core layer, falling back from a removed higher-priority preset, and preserving edited generated content. Assisted-by: GitHub Copilot (model: GPT-5.6 Sol, autonomous) Co-authored-by: Copilot App <223556219+Copilot@users.noreply.github.com> Copilot-Session: 1b2c095d-b45c-4d52-8d56-bd6121d96ab6 * fix(presets): tighten legacy constitution provenance Trust only the immutable bundled/source constitution template when migrating legacy projects without provenance. Do not infer core provenance from mutable project templates or preset source labels, including IDs beginning with core. Also detect convention-based constitution-template files before preset removal so unchanged generated constitutions reconcile to the next resolver layer. Assisted-by: GitHub Copilot (model: GPT-5.6 Sol, autonomous) Co-authored-by: Copilot App <223556219+Copilot@users.noreply.github.com> Copilot-Session: 1b2c095d-b45c-4d52-8d56-bd6121d96ab6 * fix(presets): preserve files with invalid provenance Use immutable-core legacy migration only when the provenance sidecar is absent. If a sidecar is malformed or its hash does not match the live constitution, treat the file as edited and preserve it. Assisted-by: GitHub Copilot (model: GPT-5.6 Sol, autonomous) Co-authored-by: Copilot App <223556219+Copilot@users.noreply.github.com> Copilot-Session: 1b2c095d-b45c-4d52-8d56-bd6121d96ab6 * fix(presets): reconcile constitution on stack changes Assisted-by: GitHub Copilot (model: GPT-5.6 Sol, autonomous) Co-authored-by: Copilot App <223556219+Copilot@users.noreply.github.com> Copilot-Session: 1b2c095d-b45c-4d52-8d56-bd6121d96ab6 * fix(presets): guard constitution reconciliation edges Assisted-by: GitHub Copilot (model: GPT-5.6 Sol, autonomous) Co-authored-by: Copilot App <223556219+Copilot@users.noreply.github.com> Copilot-Session: 1b2c095d-b45c-4d52-8d56-bd6121d96ab6 --------- Co-authored-by: Copilot App <223556219+Copilot@users.noreply.github.com> |
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77ebd5fcea |
fix(workflows): fail while/do-while steps on non-list steps instead of crashing (#3519)
`WhileStep.validate()` and `DoWhileStep.validate()` already reject a non-list `steps` body, but the engine's `execute()` path does not auto-validate (see `WorkflowEngine.load_workflow`, whose docstring notes the definition is "not yet validated"). On an unvalidated run the body is returned as `next_steps`, and the engine feeds it straight into `_execute_steps`, which iterates it as step mappings. A non-list `steps` — a single mapping or scalar authoring mistake — was iterated element-wise (a dict yields its string keys, a str its characters) and raised `AttributeError` on `.get()`, taking down the whole run; the engine invokes `step_impl.execute()` with no surrounding try/except. Guard both `execute` paths to return a FAILED StepResult naming the type error instead, mirroring the if/switch non-list-branch and fan-out non-list `items` handling. The do-while body always dispatches on the first call, so its guard is unconditional; the while body only dispatches when the condition is truthy, so its guard fires only then — a false condition leaves a non-list `steps` benign and the step completes, unchanged. The condition/expression is still evaluated first, so its result is surfaced in the step output for downstream context. Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com> |
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e742b8010a |
fix(workflows): raise catalog error, not raw ValueError, on a malformed catalog URL (#3484)
* fix(workflows): raise catalog error, not raw ValueError, on a malformed catalog URL The four catalog URL validators in `workflows/catalog.py` (`WorkflowCatalog`/`StepCatalog` `_validate_catalog_url`, and the nested fetch-path validators) accessed `urlparse(url).hostname` unguarded. A malformed authority — e.g. an unterminated IPv6 bracket `https://[::1` or a bracketed non-IP host `https://[not-an-ip]` — makes urlparse / hostname raise `ValueError`. Each validator's contract is to raise a domain error (`WorkflowValidationError` / `StepValidationError` / `WorkflowCatalogError` / `StepCatalogError`), and the command handlers catch only those. So `specify workflow catalog add "https://[::1"` surfaced an uncaught `ValueError` traceback instead of the clean `Error: Catalog URL is malformed` + exit 1 that a bad URL should give. The fetch-path validators also run on the post-redirect `resp.geturl()`, so a hostile redirect target could crash the fetch the same way. Guard each `urlparse`/`.hostname` access with `try/except ValueError -> domain error`, mirroring the fixes already applied to `specify_cli.catalogs` (#3435) and the bundler adapters (#3433). Also read `hostname` once and reuse it for the host check, matching those siblings. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * test(workflows): cover post-redirect malformed-URL guard (#3484 review) Copilot review asked for regression tests on the fetch-path validators that re-check resp.geturl() after redirects — the branch that turns a malformed redirect target into a domain error instead of a raw ValueError. - test_fetch_malformed_redirect_target_raises_catalog_error on both TestWorkflowCatalog and TestStepCatalog: stub open_url with a response whose geturl() is malformed (https://[::1 / https://[not-an-ip]/x) while entry.url is valid, so validation only trips on the redirect target, and assert _fetch_single_catalog raises WorkflowCatalogError / StepCatalogError with a "malformed" message (force_refresh + fresh project_dir so no cache masks it). - Test-the-test: both fail on pre-fix source (raw ValueError re-wrapped as "...Invalid IPv6 URL", no "malformed" match) and pass with the guard. Also merges latest upstream/main into the branch. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com> |
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d83b8d1188 |
fix: add trailing newline to init-options.json output (#3509)
`save_init_options()` omitted a final newline, causing `end-of-file-fixer` from .pre-commit-config.yaml (#3430) to flag a diff on every `specify integration upgrade` run. Append `\n` to the `json.dumps()` output to match POSIX expectations and align with `integration_state.py` which already includes the trailing newline. Ref: https://github.com/github/spec-kit/pull/3430 |
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d7b6626218 |
feat(workflows): align workflow CLI with extension command surface (#3419)
* feat(workflows): align workflow CLI with extension command surface Adds the missing workflow commands and flags so the workflow CLI matches the extension/preset pattern: add --dev and --from, search --author, update, enable and disable. Disabled workflows are blocked from running and marked in list output. Fixes #2342 Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * fix(workflows): preserve disabled state on update, guard corrupted registry entries Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * fix(workflows): guard list against corrupted registry entries, re-raise typer.Exit in catalog install workflow list now skips non-dict registry entries with a warning instead of crashing, matching update/enable/disable. The broad except in _install_workflow_from_catalog no longer swallows typer.Exit, so precise errors like the non-HTTPS redirect message are not duplicated. Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * fix(workflows): escape rich markup in id-mismatch errors and validate --from source early The two id-mismatch error paths interpolated repr() into Rich markup, so a stray bracket in a user typo could be parsed as markup. Route both through rich.markup.escape. `workflow add <source> --from <url>` also validated the source only after downloading. Validate it up front so a URL/path/typo fails without a network fetch. Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * fix(workflows): escape rich markup in list output and catalog install errors, isolate update failures workflow list now escapes id/name/version/description before printing, matching how extensions render user-editable fields. The catalog install helper computes safe_wf_id once and uses it for every early error path plus the final failure message. workflow update wraps _safe_workflow_id_dir and the backup read inside the try/except typer.Exit block so an unsafe id in a corrupted registry fails that one workflow and the rest continue. Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * fix(workflows): escape rich markup in --from download exception message Matches how the catalog install path escapes exception strings. Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * fix(workflows): catch OSError in per-workflow update loop and make restore best-effort Transient FS errors (perms, disk full) from backup read or write no longer abort the whole update run. The restore is wrapped in its own try/except so a failed write only warns, and the offending workflow is reported via 'Failed to update' like other per-workflow failures. Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * fix(workflows): escape rich markup in search output workflow search now escapes catalog-derived name/id/version/description/ tags before printing, matching extension search and workflow list. Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * fix: escape workflow validation errors before Rich output Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * fix(workflows): escape remaining unescaped Rich markup paths Covers the last few review threads not yet addressed: - Escape yaml.YAMLError text in the local workflow add install path (matches the already-escaped download/catalog paths). - Escape the non---dev local directory fallback's "No workflow.yml found in <path>" message (the --dev branch already escaped it). - Escape the redirected final_url in the --from non-HTTPS redirect error (IPv6 literals like http://[::1]/... are legal and contain brackets). - Escape the "Downloaded workflow is invalid" exception message in _install_workflow_from_catalog, matching the sibling catalog-install exception handler a few lines above it. Adds regression tests for each in TestWorkflowCliAlignment, following the existing escaping-test pattern in this class. Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * fix(workflows): escape workflow name/id in install success messages Workflow names and ids come from user-controlled YAML or external catalog data; printing them unescaped lets bracket characters be interpreted as Rich tags. Escape them in the add/catalog-install success messages and the remaining catalog error paths, matching the rest of the output hardening. Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * fix(workflows): fail cleanly on unparseable catalog install URLs urlparse raises ValueError on e.g. an unbalanced IPv6 literal before the invalid-URL branch is reached; on workflow update that also bypassed the per-workflow handler and aborted the whole command. Convert the parse failure into a clean error so add fails cleanly and update skips just the affected workflow. Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * fix(workflows): reject catalog updates whose downloaded version mismatches The update path never verified the downloaded workflow carries the catalog version that triggered the update, so a stale or misconfigured URL could report success while leaving the old version installed or downgrading it. Pass the expected version into the install helper and fail the update when the downloaded definition does not match. Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * fix(workflows): validate workflow ID in run command and document new CLI flags Path-equivalent spellings like "align-wf/" previously bypassed the registry disabled check because the engine normalizes the path while the registry matches the raw string. workflow run now validates non-file sources against the workflow ID pattern before lookup. Also updates docs/reference/workflows.md with --dev/--from install options, update/enable/disable commands, and the search --author flag. Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * fix(workflows): enforce disabled state for direct paths to installed workflows Running the installed copy's YAML directly (specify workflow run .specify/workflows/align-wf/workflow.yml) skipped the registry check. File sources resolving inside .specify/workflows/<id>/ now map back to the workflow ID and refuse to run while disabled. Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * fix(workflows): reject explicit empty --from URL instead of catalog fallback 'workflow add foo --from ""' fell through 'from_url or ...' to a catalog install. Distinguish None from empty string so explicit values stay on the URL-validation path and fail closed. Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * fix(workflows): registry rollback on save failure, consistent disabled check, honest update summary - WorkflowRegistry.add now rolls back its in-memory mutation when save() raises, so a later successful save cannot persist metadata for a failed update alongside the restored YAML backup. - workflow run uses the same truthiness check for 'enabled' as list and disable, so malformed values like 0 or null refuse to run. - workflow update reports 'No workflows were eligible for update' when every target was skipped instead of claiming all are up to date. Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * fix(workflows): guard non-string catalog URL and keep enable/disable rollback intact - A truthy non-string catalog url (e.g. 123) reached urlparse and raised AttributeError, escaping the clean error path; validate it is a string. - enable/disable mutated the live registry entry before add(), so add's rollback snapshot captured the already-toggled object; pass a fresh mapping instead. Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * fix(workflows): tolerate non-dict registry entries in add and clarify test docstrings A corrupted-but-parseable registry entry (e.g. a string value) crashed WorkflowRegistry.add with AttributeError on existing.get. Guard the non-dict case while still restoring the original raw value on rollback. Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * fix(workflows): atomic registry save and accurate mixed-target update summary - save() wrote the registry with open('w'), so a failed dump truncated the file and the next load reset every entry. Write to a sibling temp file and os.replace into place. - workflow update no longer claims all workflows are up to date when some targets were skipped; it reports checked-only status with a skipped count. Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * fix(workflows): exclusive temp file for registry save and cwd-independent disabled guard - save() now uses tempfile.mkstemp in the workflows dir (matching the engine's atomic writer), so a pre-created symlink at a predictable .tmp path cannot redirect the write and concurrent processes cannot collide. - The direct-path disabled guard derives the owning project from the resolved file path instead of the caller's cwd, so running an installed workflow's YAML from outside the project still refuses when disabled. Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * fix(workflows): symlink guards and shape validation in workflow registry, dev-dir file check - WorkflowRegistry now mirrors StepRegistry: _load refuses symlinked parents/registry file and normalizes a non-dict workflows field; save() rejects symlinked paths before writing. - workflow add --dev requires workflow.yml to be a regular file so a directory named workflow.yml gets the documented CLI error instead of an uncaught IsADirectoryError. Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * fix(workflows): validate download redirects before following them All three workflow download sites (add --from, catalog install, step install) passed no redirect_validator to open_url, so an HTTPS URL redirecting to cleartext HTTP issued the insecure request before the post-hoc geturl() check reported it. Shared validator now rejects non-HTTPS redirects (loopback HTTP allowed) pre-follow, matching the preset download path. Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * test(workflows): accept redirect_validator kwarg in step-add open_url fakes Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * fix(workflows): guard directory-shaped workflow.yml and unreadable registry - workflow add's plain local-path fallback (no --dev) checked wf_file.exists() before installing, so a directory literally named workflow.yml passed the guard and _validate_and_install_local() leaked an uncaught IsADirectoryError instead of the documented CLI error. Use is_file(), matching the --dev branch's existing guard. - WorkflowRegistry._load() treated any OSError while reading an existing registry the same as corrupted JSON, resetting to an empty in-memory registry. A later save() would then silently persist that empty state via os.replace, discarding every previously installed workflow entry. Track a _load_error flag on OSError-during-read and have save() refuse to write when it is set, so a transient I/O failure can no longer overwrite intact data on disk. - docs/reference/workflows.md: document `--from <url>` with its value placeholder, matching extensions.md and presets.md. Assisted-by: GitHub Copilot (model: Claude Sonnet 5, autonomous) Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * fix(workflow): rollback registry.remove() and guard OSError at CLI boundaries Critical: WorkflowRegistry.remove() deleted the in-memory entry then called save() with no rollback, unlike add(). Combined with workflow_remove deleting the workflow directory before calling registry.remove(), a save failure permanently destroyed the workflow's files, left the on-disk registry still claiming it installed, and surfaced a raw unhandled OSError with no CLI message. - WorkflowRegistry.remove() now rolls back the in-memory entry on a save() OSError, mirroring add()'s existing rollback pattern. - workflow_remove persists the registry removal (registry.remove(), wrapped in try/except OSError -> clean escaped message) before deleting any files, so a save failure never touches the workflow directory. Important sibling paths: workflow add (local/--dev/--from and catalog), enable, and disable all called registry.add() without catching its deliberate OSError, so a save failure surfaced either an orphaned install directory (fresh local/catalog installs) or a raw/unhandled exception with no clean CLI output. - _validate_and_install_local (backs local/--dev/--from) now removes the freshly created directory on a fresh install, or restores the prior workflow.yml bytes on a reinstall-over-existing-local install, before raising a clean escaped error. - _install_workflow_from_catalog wraps the final registry.add() using the function's own established convention (rmtree the just-downloaded workflow_dir, then a clean escaped error) -- workflow_update's existing backup/restore around this function is unaffected. - workflow_enable/workflow_disable catch registry.add()'s OSError and print a clean escaped message instead of leaking the exception. Added failing-first tests proving each behavior (registry-unit rollback test, CLI-level remove/add/enable/disable save-failure tests parametrized where they share one root cause), all confirmed red before the fix and green after. Assisted-by: GitHub Copilot (model: Claude Sonnet 5, autonomous) Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * fix(workflow): preserve prior catalog install on reinstall registry-save failure _install_workflow_from_catalog's final registry.add() failure handler unconditionally rmtree'd workflow_dir. That's safe for a brand-new install, but plain `workflow add <catalog-id>` also allows re-adding an already-installed workflow, downloading the new version over the existing directory first. If registry.add() then failed to save, the unconditional rmtree deleted the prior working install while the registry (after its own rollback) still reported it installed -- data loss with no way back. workflow_update already avoids this via an outer backup/restore around this function, but plain add has no such caller. Fix mirrors _validate_and_install_local's existed-before/backup-aware handling: capture whether workflow_dir existed and back up its workflow.yml bytes before any download write, then on a registry.add() OSError, restore those bytes for a reinstall or rmtree only a brand-new directory. Only one file (workflow.yml) is ever written by this path, so no further per-file bookkeeping is needed. Added a failing-first regression: install a catalog workflow, re-add it with a simulated registry save OSError, and assert a clean error, the original workflow.yml restored byte-for-byte, and the registry still reporting the original version installed. Confirmed red (prior file deleted) before the fix, green after. Assisted-by: GitHub Copilot (model: Claude Sonnet 5, autonomous) Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * fix(workflow): centralize catalog-install cleanup across all failure branches _install_workflow_from_catalog is new in this PR and has seven failure branches after the mkdir/download step, each independently rmtree'ing workflow_dir: redirect-to-non-HTTPS rejection, a generic download exception, invalid downloaded YAML, a validate_workflow failure, a workflow-id/catalog-key mismatch, a version mismatch, and (fixed in the prior commit) a registry.add() OSError. Only the last one had been special-cased to spare a prior working install on reinstall; the other six still unconditionally deleted the whole directory, so re-adding an already-installed catalog workflow and hitting any of those six earlier failures destroyed the working install even though nothing about it had actually changed. Replaced all seven ad hoc rmtree call sites with a single local _cleanup_failed_install() helper that closes over the existed_before / prior_workflow_bytes captured once at the top of the function: restore the prior workflow.yml for a reinstall, or rmtree only a directory that this attempt itself created. Every failure branch now calls this one helper, so the fix is structural rather than duplicated, and every existing error message/exit code is unchanged -- only the cleanup performed before each message is different. Added a parametrized regression test covering the four early-failure trigger points reachable from plain workflow add (redirect rejection, download exception, invalid YAML, ID mismatch): each installs a catalog workflow, re-adds it while forcing that specific failure, and asserts a clean error plus the original workflow.yml surviving byte-for-byte. Confirmed red against the unfixed code (all four raised FileNotFoundError reading the deleted file) before applying the helper, green after. Assisted-by: GitHub Copilot (model: Claude Sonnet 5, autonomous) Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * fix(workflow): restore registry entry verbatim on post-removal rmtree failure workflow_remove now persists registry.remove() before deleting any files (fixed previously), but if the registry write succeeds and the subsequent shutil.rmtree(workflow_dir) then fails, the registry was left claiming the workflow uninstalled while its directory remained on disk -- an orphaned install with no path back to a clean state. workflow_step_remove already handles this exact sequencing by capturing the registry entry before removal and restoring it directly into registry.data plus save() (bypassing add(), which would stamp a new updated_at) if the directory removal fails afterwards. Applied the same pattern to workflow_remove: capture registry_metadata via registry.get() before registry.remove(), and on an rmtree OSError, write it straight back into registry.data["workflows"][workflow_id] and save(), matching workflow_step_remove's restore-failure handling (a yellow warning, not a hard failure, since the primary error is already about to be reported). Existing error message and exit behavior for the rmtree failure are unchanged. Added a failing-first regression: install a workflow, monkeypatch shutil.rmtree to raise OSError, and assert a clean existing error message, the directory remaining (rmtree never actually deleted anything), and the registry entry restored byte-for-byte identical (including installed_at/updated_at) -- proving the fix bypasses add() and doesn't re-stamp timestamps. Confirmed red (registry entry stayed None) before the fix, green after. Assisted-by: GitHub Copilot (model: Claude Sonnet 5, autonomous) Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * Fix 4 current Copilot review findings on workflow run/registry/install 1. workflow run ownership check followed symlinks via Path.resolve() before mapping a direct YAML path back to its installed workflow ID. A symlinked .specify/workflows/<id>/workflow.yml resolved outside the tree, missed the ownership match entirely, and let the disabled-workflow guard be silently skipped while engine.load_workflow still followed the symlink. Now maps ownership from a lexically-normalized path (os.path. normpath, no symlink following) and explicitly refuses to run if the installed <id> directory or workflow.yml leaf is itself a symlink. Direct external workflow paths that don't match .specify/workflows/... are unaffected. 2. WorkflowRegistry._load() caught a read OSError and silently fell back to an empty in-memory registry, only blocking a later save(). Callers that only query is_installed()/get()/list() before writing a file (e.g. commands/init.py's bundled speckit install, which overwrites workflow.yml once is_installed() reports false) could act on that false-empty state and destroy real data before ever reaching save(). _load() now raises OSError immediately so an unreadable registry fails closed at construction, before any query or side effect is possible. Added _open_workflow_registry() to give every CLI command a consistent clean-error boundary around registry construction. 3. _validate_and_install_local's mkdir/copy2 ran before the try/except that protected registry.add(); a copy2 failure (e.g. a truncating partial write on a reinstall) was not caught at all, so the existing backup-restore cleanup never ran and the prior working workflow.yml was corrupted with a raw traceback surfaced to the user. mkdir/copy2 now run inside the same rollback-protected section as registry.add(), sharing one _cleanup_failed_install() helper. 4. workflow update's skip message claimed any non-catalog source was installed "from a local path or URL", which is wrong for the bundled speckit workflow (source: "bundled"). Message is now source-neutral. Verified all 4 threads are current (not outdated) via GraphQL review thread query on PR #3419, HEAD |
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2537be8144 |
fix(extensions): stop env-var config leaking across prefix-colliding extension IDs (#3497)
* fix(extensions): stop env-var config leaking across prefix-colliding IDs (#3494) Because ``_`` doubles as both the separator between an extension ID and its config path AND the substitute for ``-`` inside an extension ID, an env var like ``SPECKIT_GIT_HOOKS_URL`` starts with *both* the ``SPECKIT_GIT_`` prefix of the ``git`` extension and the ``SPECKIT_GIT_HOOKS_`` prefix of a co-installed ``git-hooks`` extension. ``ConfigManager._get_env_config`` matched only on the shorter prefix, so the same env var silently surfaced inside both extensions' configs (as ``{'hooks': {'url': ...}}`` for ``git`` and ``{'url': ...}`` for ``git-hooks``). Impact: config intended for one extension leaked into another and, worse, could flip ``config.<field> is set`` hook conditions on the wrong extension. Route the env var to the extension whose normalized ID is the longest match — the more specific one. When another installed sibling's normalized ID + ``_`` claims the remainder, skip the var here. The sibling scan reads ``.specify/extensions/`` directly and degrades to a no-op if the dir is missing (fresh project / ad-hoc harness), so the pre-fix single-extension behaviour is unchanged when there is no collision. Distinct from #3350 (intra-extension prefix collision between two keys of the same extension) — this fixes the cross-extension case. Fixes #3494 * fix(extensions): source sibling scan from registry, not directory Address Copilot review on #3497: ``ExtensionManager.remove(..., keep_config=True)`` preserves the extension directory but drops the registry entry, so the previous directory-scan approach would treat a config-only leftover as an installed sibling and silently discard ``SPECKIT_<sibling>_*`` env vars into no owner. Sourced the sibling list from ``ExtensionRegistry.keys()`` — the registry is the source of truth for "installed" — and kept the same graceful ``[]`` fallback so the fresh-project / ad-hoc harness path is unaffected. Updated the ``TestConfigManagerCrossExtensionEnvLeak`` ``_install`` helper to register its fake installations and added ``test_config_only_leftover_not_treated_as_sibling`` to lock in the new behaviour for the ``keep_config=True`` scenario. Full suite: 3978 passed, 110 skipped. * fix(extensions): swallow non-UTF-8 registry in sibling scan Address Copilot follow-up on #3497: ``ExtensionRegistry._load()`` catches ``JSONDecodeError`` / ``FileNotFoundError`` but not decode failures — a registry file with invalid text encoding would surface a ``UnicodeDecodeError`` out of ``_sibling_extension_ids`` and break every config read instead of degrading to the documented pre-fix behaviour. Extend the fallback in ``_sibling_extension_ids`` to also catch ``UnicodeError`` and add ``test_non_utf8_registry_does_not_crash`` as a regression pin (kept ``_load()`` itself out of scope — that broader hardening belongs in a separate PR since it affects all readers). Full suite: 3979 passed, 110 skipped. |
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6ab0c1dac1 |
fix(integrations): escape control characters in goose recipe YAML renderer (#3384)
* fix(integrations): escape control characters in goose recipe YAML renderer YAML forbids C0 control characters (except tab and newline) and DEL in every scalar form, and a bare CR acts as a line break inside a block scalar. _render_yaml wrote the body verbatim into a |2 literal block scalar, so such bodies produced recipes the YAML parser rejects. Detect block-scalar-unsafe characters and fall back to an escaped double-quoted scalar via yaml.safe_dump, mirroring the TOML renderer's fallback strategy from #3341. Fixes #3382 Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * fix(integrations): use sys.maxsize instead of float inf for yaml width Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * fix(integrations): extend block-scalar guard to C1 controls and Unicode line breaks YAML's printable set excludes C1 controls (U+0080-U+009F except NEL), and YAML 1.1 treats NEL/LS/PS as line breaks inside a literal block scalar, so bodies carrying any of these still produced unparseable recipes. Widen the fallback guard to the full class and cover it in the regression loop. Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * fix(integrations): also treat surrogates and U+FFFE/U+FFFF as block-scalar unsafe YAML's printable set also excludes lone UTF-16 surrogates and the non-characters U+FFFE/U+FFFF; bodies carrying them still hit the literal block path and produced unparseable recipes. Extend the guard and the regression loop. Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * docs(integrations): clarify YAML prompt serialization Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> --------- Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> |
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52c1acf8ba |
fix(workflows): validate command step input/options are mappings (#3262)
* fix(workflows): validate command step input/options are mappings CommandStep.validate() only checked for 'command'; execute() then does input.items() and options.update(step_options). A non-mapping input:/options: (e.g. a YAML list or scalar) raised AttributeError at run time, bypassing the per-step FAILED/continue-on-error contract -- unlike the sibling steps (switch 'cases', fan-out 'step') which type-check their config fields in validate(). Add the same checks, plus a defense-in-depth coercion in execute() since the engine does not auto-validate before running a step. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: fix code-comment typo in CommandStep.validate The explanatory comment said options.update(options) but execute() does options.update(step_options). Comment-only change; no behavior change. Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com> * fix(workflows): command step FAILS on malformed input/options instead of coercing execute() previously coerced a non-mapping 'input' to {} and silently ignored a non-mapping 'options', then dispatched the command anyway. For a workflow that skipped validation (the engine does not auto-validate before execute()), that let an explicitly malformed step run with empty args and report COMPLETED — masking the config error and defeating the per-step FAILED / continue_on_error semantics this change is meant to provide. Both now return a FAILED StepResult with the same contract error validate() reports (never crashing on .items()/.update()). Valid mapping configs are unaffected. Strengthened the execute() test to assert FAILED + the exact 'must be a mapping' error for input and options (fails before: the result carried the downstream dispatch error, not the shape error). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com> |
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fc1a3fd76c |
fix(presets): resolve() honors manifest-declared file: for installed presets (#3351)
* fix(presets): resolve() honors manifest-declared file: for installed presets PresetResolver.resolve()'s tier-2 (installed presets) loop was convention-only: it looked for templates/<name>.md and <name>.md, ignoring a preset manifest that declares the template with an explicit, non-convention file: path. So resolve() returned the core template (and resolve_with_source() misattributed source='core') while collect_all_layers()/resolve_content() correctly used the preset's declared file — a divergence inside the same class. It could also return a stray convention-path file the manifest deliberately points away from. Mirror collect_all_layers()'s manifest-first logic: use the declared file: when present (skip convention fallback if it's missing, to avoid masking typos), and fall back to the convention walk only when the manifest is absent or doesn't list the template. Co-Authored-By: Claude Fable 5 <noreply@anthropic.com> * docs(presets): clarify the empty/falsey manifest-file branch comment Per review: 'file' is a required key for every template entry (PresetManifest._validate()), so the manifest-found branch is reached for an empty/falsey/non-usable 'file' value, not a truly absent one. Reword the comment to say so. Comment-only. Co-Authored-By: Claude Fable 5 <noreply@anthropic.com> * fix(presets): resolve() returns only real files; test missing-file skip Per review: - Use is_file() (not exists()) when honoring a manifest-declared file: so a manifest pointing at a directory is treated as missing rather than returned to a caller that will read_text() it. Applied in both resolve() and collect_all_layers() so the two stay consistent. - Add a regression test for the skip-convention-fallback-when-declared-file- missing behavior: manifest declares a missing custom/spec.md while the pack has a convention templates/spec-template.md; resolve() must skip the pack and fall through to core, not pick up the stray convention file. Co-Authored-By: Claude Fable 5 <noreply@anthropic.com> * fix(presets): resolve()/collect_all_layers() require a regular file for manifest file: A manifest-declared file: path is honored via exists(), which also accepts a directory. If a preset points file: at a directory, resolve() returned it and downstream read_text() crashes. Use is_file() in both resolve() and collect_all_layers() so a non-file (directory) is treated as missing and the convention fallback is skipped (pack yields to core), matching the existing missing-file behavior. Adds a directory-at-file: test (fails on exists(), passes on is_file()) that also asserts collect_all_layers() never returns the directory as a layer. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * refactor(presets): extract shared _manifest_declared_template for resolve()/collect_all_layers() Both methods reimplemented the manifest-entry lookup + authoritative-fallback rules independently — the exact duplication that let them diverge and caused the bug this PR fixes. Extract a single _manifest_declared_template(pack_dir, name, type) -> (entry, candidate) helper (candidate is the declared file only when it is_file(); a declared-but-unusable file returns (entry, None) so callers skip the convention fallback). resolve() and collect_all_layers() now both call it, so their manifest-first resolution cannot silently diverge again. Pure refactor, behavior-preserving: full test_presets.py (331) still passes, including the directory-at-file:, missing-file, and manifest-file-wins cases. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> --------- Co-authored-by: Claude Fable 5 <noreply@anthropic.com> |
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993083405e |
fix(init): don't block on confirmation for 'init --here' without a TTY (#3236)
* fix(init): don't block on confirmation for 'init --here' without a TTY When 'specify init --here' targets a non-empty directory without --force, it called typer.confirm() unconditionally. In a non-interactive session (no TTY -- CI, piped, agent) there is no input, so the prompt reads EOF and aborts unhelpfully (or blocks), with no actionable message. The named-project path already fails fast and points to --force; --here was the inconsistent outlier. Guard the confirmation with the existing _stdin_is_interactive() helper: when non-interactive, print a clear 'directory not empty; re-run with --force' error and exit 1 instead of prompting. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * fix(init): honor piped confirmation for 'init --here'; only fail-fast on empty stdin The first version of this fix short-circuited on '_stdin_is_interactive()' (isatty) before typer.confirm, which broke 'init --here' when confirmation is piped (e.g. 'echo y | specify init --here' / CliRunner input='y\n') -- a non-TTY pipe with valid input was wrongly rejected, regressing test_init_here_without_force_preserves_shared_infra. Instead, call typer.confirm normally (piped 'y'/'n' is honored) and catch the Abort/EOFError it raises only when stdin is empty, converting that to the actionable '--force' guidance. This keeps the UX win for the no-input case without rejecting piped input. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * fix(init): distinguish interactive cancel from no-input; defer merge warning Address Copilot review on the --here non-empty path: (1) treat typer.Abort during an interactive confirm (e.g. Ctrl+C) as a normal cancellation (exit 0), and only emit the '--force' guidance + exit 1 when there is no TTY (empty stdin / EOF) -- no longer conflating the two; (2) move the 'will be merged / may overwrite' warning so it only shows when actually proceeding (force) or folded into the confirmation prompt, not on the fail-fast path where nothing is merged. Piped confirmation (e.g. 'echo y | specify init --here') is still honored, which is why the prompt is attempted rather than refused outright when non-interactive -- the existing test_init_here_without_force_preserves_shared_infra pipes 'y' and must succeed. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * fix(init): fail fast on non-interactive --here instead of prompting Per Copilot review: do not call typer.confirm when stdin is not a TTY -- an open-but-idle non-TTY stdin (CI/agent) could block on the prompt. When the directory is non-empty and --force is not given, fail fast with '--force' guidance unless an interactive terminal is present. Interactive confirm still offers the merge-but-preserve path (distinct from --force, which overwrites); a Ctrl+C there is treated as a normal cancellation (exit 0). The merge/overwrite warning is only printed when actually proceeding, not on the fail-fast path. Updated the preserve-merge E2E test to simulate an interactive terminal so it exercises the confirm path (non-interactive sessions now require --force). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * fix(init): honor piped y/n for 'init --here', error only on no-input Per maintainer review: restore the second-revision shape. Calling typer.confirm normally keeps 'echo y | specify init --here' reaching the non-destructive preserve-merge path (and piped 'n' cancels with exit 0). Only when no confirmation input is available at all (closed/empty stdin -> typer.Abort/EOFError) is it converted into the actionable error that points at --force. This drops the _stdin_is_interactive fail-fast that broke the common piped-confirm idiom and made preserve-merge interactive-only. The preserve test no longer needs to monkeypatch _stdin_is_interactive - it passes on the real contract. Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com> * fix(init): preserve interactive-cancel semantics; fold merge risk into the prompt Two review-driven refinements to the 'init --here' non-empty confirm, keeping the maintainer-endorsed control flow (piped y/n honored; non-interactive EOF → actionable --force error): 1. typer.confirm raises typer.Abort for BOTH an interactive Ctrl+C and an EOF on closed/empty stdin. Catching it unconditionally reported 'no confirmation input available, use --force' and exited 1 even when the user cancelled at a real TTY. Branch on _stdin_is_interactive(): a TTY cancel is a normal exit 0 ('Operation cancelled'); only non-interactive EOF becomes the --force error. 2. Fold the merge-risk warning into the confirmation question instead of printing it unconditionally beforehand, so the EOF/no-input path (which exits without changing anything) no longer prints a misleading 'will be merged' line first. Adds test_init_here_interactive_cancel_exits_zero (fails before: exit 1 with --force; passes after: exit 0, 'cancelled', pre-existing file untouched). The non-interactive EOF and piped-y preserve-merge tests are unchanged and still pass. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com> |
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c05a626cbc |
fix(integrations): exit cleanly on unbalanced quote in --integration-options (#3457) (#3466)
* fix(integrations): exit cleanly on unbalanced quote in --integration-options (#3457) `_parse_integration_options` called `shlex.split(raw_options)` unguarded, so an unbalanced quote in the flag value (e.g. `--integration-options='--commands-dir "foo'`) made shlex raise `ValueError: No closing quotation` and a raw traceback escaped — unlike every other bad-input path in this function (unknown option, missing value, unexpected value), which print a message and exit 1. Reachable from `specify init --integration-options=...` and every `specify integration install/switch/upgrade/migrate --integration-options=...`. Wrap the split in a try/except ValueError that prints a one-line error and raises `typer.Exit(1)`, matching the existing loud-fail UX. Add a test asserting the unbalanced-quote input raises `typer.Exit` with exit code 1. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Potential fix for pull request finding Co-authored-by: Copilot Autofix powered by AI <175728472+Copilot@users.noreply.github.com> --------- Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com> Co-authored-by: Copilot Autofix powered by AI <175728472+Copilot@users.noreply.github.com> |
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0acb5c6461 |
fix(integrations): declare kiro-cli multi-install safe (#3471) (#3485)
kiro-cli confines all of its managed files to an isolated agent root
(`.kiro/`, with commands in `.kiro/prompts`) that no other integration
writes to, so it meets every documented criterion for multi-install
safety — but `KiroCliIntegration` never set `multi_install_safe = True`.
As a result, co-installing kiro-cli alongside any other integration left
`specify integration status` permanently in ERROR:
error unsafe-multi-install: Installed integrations are not all
declared multi-install safe: kiro-cli
`--force` bypasses the install-time gate but does not clear the status
error, and there is no flag or config to acknowledge it, so the error is
permanent while both integrations remain installed.
Set `multi_install_safe = True`. The registry's parametrized
multi-install-safe contract tests (static isolated root, distinct agent
roots / command dirs, disjoint manifests) now cover kiro-cli
automatically, and a focused regression test pins the declaration so a
future edit cannot silently drop it and reintroduce the error.
Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
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a965413a24 |
fix(workflows): fail fan-in step on non-list wait_for instead of crashing (#3482)
`FanInStep.validate()` and the engine's fan-in checks both reject a
non-list `wait_for`, but the engine's `execute()` path does not
auto-validate (see `WorkflowEngine.load_workflow`, whose docstring notes
the definition is "not yet validated"). On an unvalidated run, `execute`
iterated the raw value with `for step_id in wait_for`, with two bad
outcomes:
* a scalar (`wait_for: 5`, `wait_for: null`) raised `TypeError` and
took down the whole run — the engine invokes `step_impl.execute()`
with no surrounding try/except; and
* a string (`wait_for: stepA`) silently iterated its characters and
returned a join of empty results with a COMPLETED status — the exact
"silent empty result + COMPLETED" wiring bug the engine's own fan-in
validation comment warns against.
Guard `execute` to return a FAILED StepResult naming the type error
instead, mirroring the fan-out step's non-list `items` handling. A
missing `wait_for` key still defaults to an empty list (COMPLETED),
unchanged; the guard fires only on an explicit non-list value.
Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
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e590cd8007 |
fix(workflows): fail switch step on non-mapping cases instead of crashing (#3481)
`SwitchStep.validate()` already rejects a non-mapping `cases`, but the engine's `execute()` path does not auto-validate (see `WorkflowEngine.load_workflow`, whose docstring notes the definition is "not yet validated"). On an unvalidated run, `execute` called `cases.items()` on the raw value, so a list or scalar `cases` authoring mistake raised `AttributeError` and took down the whole run — the engine invokes `step_impl.execute()` with no surrounding try/except. Guard `execute` to return a FAILED StepResult naming the type error instead, mirroring the fan-out step's non-list `items` handling. The expression is still evaluated first, so its value is surfaced in the step output for downstream context. Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com> |
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6664cf813c |
fix: mark Kiro integration as multi-install safe (#3472)
Assisted-by: Codex (model: GPT-5, autonomous) |
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3b7d95a408 |
fix: rewrite extension-relative subdir paths in generated command bodies (#3444)
* fix: rewrite extension-relative subdir paths in generated command bodies Extension command bodies reference bundled files relative to the extension root (agents/, knowledge-base/, templates/, ...). Generated SKILL.md and command files emitted those paths verbatim, so agents resolved them against the workspace root where they do not exist. Add CommandRegistrar.rewrite_extension_paths, which rewrites references to subdirectories that actually exist in the installed extension to .specify/extensions/<id>/..., and call it once in register_commands so every output format and alias gets the fix. commands/, specs/ and dot-directories are never rewritten. Fixes #2101 Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * fix: only rewrite relative extension path references Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * fix: use callable re.sub replacement for extension subdir rewrite subdir and extension_id come from filesystem directory names and were interpolated into a re.sub string replacement template. A directory name containing a backslash (e.g. assets\q) would raise re.error: bad escape, aborting command registration even when the body didn't reference it. Use a callable replacement so these values are treated literally. Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * fix: make subdir rewrite regression test cross-platform Renamed the test's subdir fixture from "assets\\q" to "assets[q]": on Windows, backslash is a path separator, so mkdir would create nested "assets/q" dirs instead of one literally-named directory, and iterdir() would only discover "assets", never exercising the rewrite. extension_id keeps a real backslash/"\\1" since it isn't used to create a directory, still verifying the callable replacement handles it literally. Added a sanity assertion for this assumption. Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * fix: apply extension subdir path rewrite in skills-mode renderer register_commands() rewrote extension-relative subdir references (agents/, knowledge-base/, etc.) via rewrite_extension_paths(), but _register_extension_skills() - the separate renderer used for active non-native skills agents (e.g. Claude with ai_skills: true) - never called it. Generated SKILL.md files left agents/... and knowledge-base/... unresolved, and mapped the extension's own templates/ through the generic project-level rewrite instead of its installed .specify/extensions/<id>/templates/ location. Reuse the existing rewrite_extension_paths() helper in _register_extension_skills() at the same point register_commands() applies it (before resolve_skill_placeholders' generic rewrite), and add a skills-mode regression test. Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * fix: apply extension subdir path rewrite on preset restore/reconcile paths _unregister_skills() restored extension-backed SKILL.md content via resolve_skill_placeholders() without first calling rewrite_extension_paths(), so removing a preset override that shadowed an extension command restored the bare, unresolvable agents/... and knowledge-base/... references. Carried extension_id/extension_dir through _build_extension_skill_restore_index() and applied the same rewrite used at initial registration before restoring. Found the identical gap in _reconcile_composed_commands()'s non-skill agent path: when a removed preset's command reverts to an extension winner, register_commands_for_non_skill_agents() was called without extension_id, so the rewrite never ran for plain command-file agents either. Passed extension_id through there too. Added regression tests for both restore paths (skills-mode and non-skill-agent command files) in tests/test_presets.py. Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> * fix: apply extension subdir path rewrite when composing over extension base PresetResolver.resolve_content() read the effective base layer's raw content directly via path.read_text() before composing append/prepend/ wrap overlays on top of it, and its outright-replace shortcut did the same. When that base layer was extension-provided, neither read path applied rewrite_extension_paths(), so composing a preset over an extension command (or an extension winning outright through resolve_content) left bare, unresolvable agents/... and knowledge-base/... references in the composed output. All three call sites (PresetManager._register_commands()'s composed path, _reconcile_composed_commands()'s composed path, and skills-mode reading the .composed file written by either) consume resolve_content's return value, so fixing the read at its source covers command output, skill output, and both initial-install and reconcile flows without threading extension identity through each caller. Tagged extension layers in collect_all_layers() with extension_id/ extension_dir, and added a _read_layer_content() helper in resolve_content() that applies rewrite_extension_paths() whenever a layer carries that extension identity — used at both raw-read sites (outright-replace shortcut and composition base). Composing (append/prepend/wrap) layers are never extension-provided (extensions are always inserted with strategy "replace"), so no other read site needs the rewrite. Added regression tests: a parametrized resolve_content() test covering append/prepend/wrap composing over an extension base, a skills-mode test asserting the composed SKILL.md resolves the extension's subdir references, and a non-skill-agent (Gemini) install-time test matching the reported live repro. Assisted-by: GitHub Copilot (model: Claude Sonnet 5, autonomous) Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> --------- Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com> |
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32952c94f4 |
feat(workflows): make shell step timeout configurable (#3327) (#3328)
* feat(workflows): make shell step timeout configurable (#3327)
The `shell` step hardcoded a 300s subprocess timeout, so any command
that legitimately runs longer than five minutes (a full build, a linter
aggregator, an integration-test target) was killed with TimeoutExpired
and failed the whole run, with no YAML knob to raise the limit.
Add an optional `timeout` field (seconds) that defaults to 300 for
backward compatibility and is threaded through to `subprocess.run`. The
timeout failure message now reports the configured value instead of a
hardcoded 300. `validate` rejects a `timeout` that is not a positive
number (bool is rejected explicitly, since it is an int subclass but a
config error rather than a duration).
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
* Potential fix for pull request finding
Co-authored-by: Copilot Autofix powered by AI <175728472+Copilot@users.noreply.github.com>
* test(workflows): cover non-finite timeout rejection in shell step
The isfinite guard added in
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86d769b47c |
fix(workflows): don't crash on membership test against a non-iterable (#3448)
* fix(workflows): don't crash on membership test against a non-iterable
the `in` / `not in` operators in _evaluate_simple_expression only guarded
`right is not None`, so `left in right` still raised a raw TypeError when the
right operand was any other non-iterable (int, bool, float). a condition like
`{{ inputs.tag in inputs.count }}` where count is a number crashed the whole
workflow run instead of evaluating.
nothing is contained in a non-iterable, so treat membership as False (`not in`
as True) via a new _safe_membership helper that swallows TypeError. this
generalizes the old None guard and mirrors _safe_compare, which already
catches TypeError for the ordering operators.
added a regression test; confirmed it fails on the pre-fix code (raw
TypeError) and that genuine list/substring membership still works.
* address review: float membership case + broaden _safe_membership docstring
- add a float right-operand assertion so the test matches its comment (was
claiming float coverage while only exercising int/bool/None).
- reword the _safe_membership docstring to describe TypeError generally
(non-iterable right is the common case, but also e.g. an unhashable left
against a set) rather than implying only the right operand matters.
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55c66125f0 |
fix(workflows): if-step validate accepts falsy non-list else (#3264)
* fix(workflows): if-step validate accepts falsy non-list else
IfThenStep.validate() guarded the 'else' branch with
'if else_branch and not isinstance(else_branch, list)'. The leading
truthiness check short-circuits for falsy non-list values (False, 0,
'', {}), so a malformed else-branch passes validation and is then
silently skipped at runtime. The sibling 'then' branch is validated
strictly; 'else' now matches by switching to an 'is not None' guard.
Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
* test(workflows): cover explicit else:None and missing-else separately
Per Copilot feedback: the parametrized valid-else test omitted the
'else' key when the value was None, so it covered only the missing-else
case, not an explicit 'else: None'. Set 'else' explicitly (including
None) in the parametrized test and add a dedicated missing-else test, so
both accepted shapes are pinned.
Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
---------
Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>
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903d707d21 |
fix(extensions): set-priority repairs corrupted boolean priority (#3268)
The set-priority skip guard 'isinstance(raw_priority, int) and raw_priority == priority' treats a stored boolean as a match because isinstance(True, int) is True and True == 1 (False == 0). So a corrupted boolean priority short-circuits to 'already has priority N' and is never rewritten to a real int — contradicting the adjacent comment that promises corrupted values get repaired. Exclude bools explicitly, mirroring normalize_priority's own bool guard. Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com> |
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f6f3540409 |
fix(presets): set-priority repairs corrupted boolean priority (#3269)
Same bool-is-int trap as the extension set-priority command: the skip guard 'isinstance(raw_priority, int) and raw_priority == priority' treats a stored boolean as a match (isinstance(True, int) is True, True == 1), so a corrupted boolean priority reports 'already has priority N' and is never rewritten to a real int — contradicting the adjacent comment. Exclude bools explicitly, mirroring normalize_priority's bool guard. Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com> |
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9d96c62901 |
fix(workflows): engine loop cap ignores bool max_iterations (#3270)
The while/do-while loop cap guard 'not isinstance(max_iters, int) or max_iters < 1' does not fall back to the default for a boolean max_iterations: isinstance(True, int) is True and True < 1 is False. The loop then runs range(max_iters - 1) == range(True - 1) == range(0), capping at a single iteration instead of the default 10. Exclude bools, mirroring the merged while/do-while validators (#3237) and this function's own continue_on_error bool handling. execute() does not auto-validate, so this engine guard is the only defence. Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com> |
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5c90a0547e |
fix(workflows): harden catalog.py against mis-shaped registry & non-string fields (#3375)
* fix(workflows): harden catalog.py against mis-shaped registry & non-string fields Two robustness gaps where WorkflowRegistry/WorkflowCatalog diverged from their StepRegistry/StepCatalog siblings, which already guard both: - WorkflowRegistry._load returned json.load() verbatim, so a JSON-valid but mis-shaped registry (a list root, or a dict lacking a 'workflows' mapping) made is_installed/get/list/remove/add crash with TypeError/KeyError. Mirror StepRegistry._load: validate the shape and reset to default, and widen the except tuple to OSError/UnicodeError. - WorkflowCatalog.search joined name/description/id without coercion, so a null or non-string field raised TypeError. Coerce with str(... or '') exactly as StepCatalog.search does. Co-Authored-By: Claude Fable 5 <noreply@anthropic.com> * test(workflows): tighten mis-shaped-registry assertions Per review: WorkflowRegistry.list() always returns a dict, so assert '== {}' directly (the previous '== {} or == []' called list() twice and admitted a shape it never returns), and reference WorkflowRegistry.SCHEMA_VERSION instead of hard-coding '1.0'. Co-Authored-By: Claude Fable 5 <noreply@anthropic.com> --------- Co-authored-by: Claude Fable 5 <noreply@anthropic.com> |
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ba1f13a8b1 |
fix(bundle): reject file:// / local download_url — catalog URLs are HTTPS-only (#3344)
* fix(bundle): resolve file:// download_url via the file-URL helper _download_manifest built the local path from raw parsed.path, which keeps the leading slash of file:///C:/x (yielding a \C:\x path that never exists on Windows) and skips percent-decoding (my%20bundles stays encoded on every OS) — so a catalog entry whose download_url is the canonical URI Python itself produces via Path.as_uri() always fails with 'Bundle manifest not found'. Route the file scheme through the existing bundler.services.adapters._file_url_to_path helper, which already handles drive letters, UNC hosts, and percent-decoding for catalog file:// URLs (make_catalog_fetcher). The bare-path branch is unchanged. Co-Authored-By: Claude Fable 5 <noreply@anthropic.com> * fix(bundle): reject file:// / local download_url; catalog URLs are HTTPS-only Per maintainer review (route B): file:// in a catalog download_url was never intended — catalog URLs are HTTPS-only (http for localhost) across the extensions/presets/workflows catalog systems, and disk installs go through the positional path (specify bundle install <path>), handled by _local_manifest_source before catalog resolution. Remove the file:///bare-path branch from _download_manifest and route everything through _download_remote_manifest (HTTPS-only via _require_https), with an actionable error pointing at the positional install. Invert the file:// tests to assert rejection (+ a positional-path resolution test), and migrate the three bundle-info contract tests off local download_urls onto an HTTPS-only entry with a mocked manifest fetch. Co-Authored-By: Claude Fable 5 <noreply@anthropic.com> * fix(bundle): validate HTTPS before the offline gate in _download_manifest Per review: for a non-local download_url the offline check ran before any URL validation, so an invalid/non-HTTPS scheme surfaced a misleading 'Network access disabled' error under --offline when the real problem is the URL would be rejected even online. Call _require_https before the offline gate so the correct error is reported in every mode. Co-Authored-By: Claude Fable 5 <noreply@anthropic.com> * fix(bundle): reword non-HTTPS download_url error to not mislabel scheme-less URLs A scheme-less download_url (urlparse scheme == "") can be a bare filesystem path OR a missing-scheme value like 'example.com/foo.zip', not necessarily file://. Reword the reject error to state the real HTTPS-only constraint and enumerate what is rejected (file://, local path, scheme-less), instead of labeling every case 'local/file://'. Behavior unchanged; the 'bundle install' actionable hint is preserved, so the existing reject-path tests still pass. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> --------- Co-authored-by: Claude Fable 5 <noreply@anthropic.com> |
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e59da78677 |
fix(extensions): handle prefix-colliding env vars in _get_env_config (#3350)
* fix(extensions): handle prefix-colliding env vars in _get_env_config
_get_env_config built the nested dict with 'if part not in current:
current[part] = {}' and an unconditional leaf assignment. Two env vars
that collide on a prefix — e.g. SPECKIT_X_CONNECTION and
SPECKIT_X_CONNECTION_URL — then either crash (scalar processed first:
the walk indexes into a str -> TypeError 'str object does not support
item assignment') or silently clobber the nested dict (scalar processed
last). Via should_execute_hook's blanket except, the crash silently
disables every config-based hook for the extension. Guard the walk and
the leaf assignment with isinstance checks so a colliding scalar yields
to the nested dict; result is order-independent
({'connection': {'url': ...}} either way), matching _merge_configs'
dict-preserving semantics.
Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
* test(extensions): assert via public should_execute_hook, not private helper
Per review: the colliding-env hook test described should_execute_hook
swallowing the TypeError, but asserted on the private _evaluate_condition.
Assert on the public should_execute_hook instead — it returns False
(silently disabled) before the fix and True after, matching the
real-world failure mode and not coupling to a private helper.
Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
* fix(extensions): ignore malformed env var names in _get_env_config
Per review: a name like SPECKIT_<EXT>_ (no key) or with consecutive
underscores produced empty path components, creating surprising entries
under an empty key (env_config[''] = ...). Filter out empty parts and
skip the variable entirely when nothing remains.
Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
---------
Co-authored-by: Claude Fable 5 <noreply@anthropic.com>
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74d03a2814 |
fix(auth): return no matches, not raw ValueError, for a malformed URL (#3437)
find_entries_for_url did (urlparse(url).hostname or "").lower() unguarded. a malformed authority (e.g. an unterminated ipv6 bracket "https://[::1") makes urlparse/hostname raise ValueError, so instead of the empty list the function already returns for a host-less url, a raw ValueError leaked out of the shared http client (build_request / open_url call this before any url validation). no auth entry can match such a url, so treat it like the host-less case and return no matches. added a regression test over an unterminated bracket and a bracketed non-ip host; confirmed it fails on the pre-fix code. |
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14fa3ada08 |
fix(catalogs): raise catalog error, not raw ValueError, on a malformed URL (#3435)
CatalogStackBase._validate_catalog_url read parsed.hostname, which raises ValueError on a malformed authority (e.g. an unclosed ipv6 bracket "https://[::1"). every other reject path raises the class catalog error, so the raw ValueError leaked to the caller. wrap the parse + hostname access and convert ValueError to the normal error via cls._error. twin of the bundler fix in adapters._validate_remote_url. |
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1736f0746b |
fix(bundler): raise BundlerError, not raw ValueError, on a malformed catalog URL (#3433)
adapters._validate_remote_url reads parsed.hostname, which raises ValueError on a malformed authority (e.g. an unclosed ipv6 bracket https://[::1). the function's contract is to raise BundlerError for any bad url - every other reject path does - so the raw ValueError leaked to the caller and crashed the fetch instead of failing cleanly. wrap the parse and convert to BundlerError. bundler sibling of #3369, which fixed the cli extension/preset/workflow add paths but not this validator. added a regression test that fails pre-fix. |