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8dd93c0d71
The preset skill layer mirrors command templates into SKILL.md files but only ran resolve_skill_placeholders(), leaving command cross-references as raw __SPECKIT_COMMAND_<NAME>__ placeholders instead of rendering them as /speckit-<cmd> the way CommandRegistrar.register_commands() does. As a result, presets that override core commands under the agent skill layer (e.g. Claude --ai-skills) leaked the raw tokens into SKILL.md. Add a shared PresetManager._resolve_skill_command_refs() helper that maps the agent's invoke separator to IntegrationBase.resolve_command_refs(), and call it right after resolve_skill_placeholders() in every preset skill-rendering path: _register_skills() (install), the _reconcile_skills() override-restoration block, and both _unregister_skills() restore paths. This mirrors register_commands() and addresses the path divergence flagged in #1976. Add regression tests covering the install and restore paths. AI assistance: authored with Claude Code (Anthropic) — analysis, patch, and tests. Verified via the existing pytest suite plus a manual CLI install and remove cycle on a Claude --ai-skills project.